Class file_ops

Instance Methods

__init__(self, mf)
Class containing the file operations

close_mf_files(self, dir)
Close the mfin, mfdata, mfmodel, mfpar, and run files, and make the run file executable.

init_log_file(self, title)
Initialize the log file.

open_file(self, file_name)
Open the file 'file' and return all the data.

open_input(self)
Open the input file.

mkdir(self, dir)
Create the given directory, or exit if the directory exists.

open_mf_files(self, dir)
Open the mfin, mfdata, mfmodel, mfpar, and run files for writing.

read_file(self, file_name)
Attempt to read the file, or quit the script if it does not exist.

relax_data(self, file)
Open the relaxation data in the file 'file' and return all the data.

Method Details

relax_data(self, file)

Open the relaxation data in the file 'file' and return all the data.

It is assumed that the file has four columns separated by whitespace.  The columns should be:
        0 - Residue numbers
        1 - Residue names
        2 - R1, R2, or NOE values
        3 - The errors