Source Code for Module test_suite.unit_tests._prompt.test_spectrum

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  2  #                                                                             # 
  3  # Copyright (C) 2008-2012 Edward d'Auvergne                                   # 
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 21  ############################################################################### 
 22   
 23  # Python module imports. 
 24  from unittest import TestCase 
 25   
 26  # relax module imports. 
 27  from prompt.interpreter import Interpreter 
 28  from relax_errors import RelaxIntError, RelaxListIntError, RelaxNoneIntError, RelaxNoneIntListIntError, RelaxNoneStrError, RelaxNumError, RelaxStrError 
 29   
 30  # Unit test imports. 
 31  from data_types import DATA_TYPES 
 32   
 33   
 34 -class Test_spectrum(TestCase): 
 35      """Unit tests for the functions of the 'prompt.spectrum' module.""" 
 36   
 37 -    def __init__(self, methodName=None): 
 38          """Set up the test case class for the system tests.""" 
 39   
 40          # Execute the base __init__ methods. 
 41          super(Test_spectrum, self).__init__(methodName) 
 42   
 43          # Load the interpreter. 
 44          self.interpreter = Interpreter(show_script=False, quit=False, raise_relax_error=True) 
 45          self.interpreter.populate_self() 
 46          self.interpreter.on(verbose=False) 
 47   
 48          # Alias the user function class. 
 49          self.spectrum_fns = self.interpreter.spectrum 
 50   
 51   
 52 -    def test_baseplane_rmsd_argfail_error(self): 
 53          """The error arg test of the spectrum.baseplane_rmsd() user function.""" 
 54   
 55          # Loop over the data types. 
 56          for data in DATA_TYPES: 
 57              # Catch the float, bin, and int arguments, and skip them. 
 58              if data[0] == 'float' or data[0] == 'bin' or data[0] == 'int': 
 59                  continue 
 60   
 61              # The argument test. 
 62              self.assertRaises(RelaxNumError, self.spectrum_fns.baseplane_rmsd, error=data[1]) 
 63   
 64   
 65 -    def test_baseplane_rmsd_argfail_spectrum_id(self): 
 66          """The spectrum_id arg test of the spectrum.baseplane_rmsd() user function.""" 
 67   
 68          # Loop over the data types. 
 69          for data in DATA_TYPES: 
 70              # Catch the str arguments, and skip them. 
 71              if data[0] == 'str': 
 72                  continue 
 73   
 74              # The argument test. 
 75              self.assertRaises(RelaxStrError, self.spectrum_fns.baseplane_rmsd, spectrum_id=data[1]) 
 76   
 77   
 78 -    def test_baseplane_rmsd_argfail_spin_id(self): 
 79          """The spin_id arg test of the spectrum.baseplane_rmsd() user function.""" 
 80   
 81          # Loop over the data types. 
 82          for data in DATA_TYPES: 
 83              # Catch the None and str arguments, and skip them. 
 84              if data[0] == 'None' or data[0] == 'str': 
 85                  continue 
 86   
 87              # The argument test. 
 88              self.assertRaises(RelaxNoneStrError, self.spectrum_fns.baseplane_rmsd, spectrum_id='x', spin_id=data[1]) 
 89   
 90   
 91 -    def test_integration_points_argfail_N(self): 
 92          """The N arg test of the spectrum.integration_points() user function.""" 
 93   
 94          # Loop over the data types. 
 95          for data in DATA_TYPES: 
 96              # Catch the bin and int arguments, and skip them. 
 97              if data[0] == 'bin' or data[0] == 'int': 
 98                  continue 
 99   
100              # The argument test. 
101              self.assertRaises(RelaxIntError, self.spectrum_fns.integration_points, N=data[1]) 
102   
103   
104 -    def test_integration_points_argfail_spectrum_id(self): 
105          """The spectrum_id arg test of the spectrum.integration_points() user function.""" 
106   
107          # Loop over the data types. 
108          for data in DATA_TYPES: 
109              # Catch the str arguments, and skip them. 
110              if data[0] == 'str': 
111                  continue 
112   
113              # The argument test. 
114              self.assertRaises(RelaxStrError, self.spectrum_fns.integration_points, N=0, spectrum_id=data[1]) 
115   
116   
117 -    def test_integration_points_argfail_spin_id(self): 
118          """The spin_id arg test of the spectrum.integration_points() user function.""" 
119   
120          # Loop over the data types. 
121          for data in DATA_TYPES: 
122              # Catch the None and str arguments, and skip them. 
123              if data[0] == 'None' or data[0] == 'str': 
124                  continue 
125   
126              # The argument test. 
127              self.assertRaises(RelaxNoneStrError, self.spectrum_fns.integration_points, N=0, spectrum_id='x', spin_id=data[1]) 
128   
129   
130 -    def test_read_intensities_argfail_file(self): 
131          """The file arg test of the spectrum.read_intensities() user function.""" 
132   
133          # Loop over the data types. 
134          for data in DATA_TYPES: 
135              # Catch the str argument, and skip it. 
136              if data[0] == 'str': 
137                  continue 
138   
139              # The argument test. 
140              self.assertRaises(RelaxStrError, self.spectrum_fns.read_intensities, file=data[1]) 
141   
142   
143 -    def test_read_intensities_argfail_dir(self): 
144          """The dir arg test of the spectrum.read_intensities() user function.""" 
145   
146          # Loop over the data types. 
147          for data in DATA_TYPES: 
148              # Catch the None and str arguments, and skip them. 
149              if data[0] == 'None' or data[0] == 'str': 
150                  continue 
151   
152              # The argument test. 
153              self.assertRaises(RelaxNoneStrError, self.spectrum_fns.read_intensities, file='a', dir=data[1]) 
154   
155   
156 -    def test_read_intensities_argfail_spectrum_id(self): 
157          """The spectrum_id arg test of the spectrum.read_intensities() user function.""" 
158   
159          # Loop over the data types. 
160          for data in DATA_TYPES: 
161              # Catch the str arguments, and skip them. 
162              if data[0] == 'str': 
163                  continue 
164   
165              # The argument test. 
166              self.assertRaises(RelaxStrError, self.spectrum_fns.read_intensities, spectrum_id=data[1]) 
167   
168   
169 -    def test_read_intensities_argfail_heteronuc(self): 
170          """The heteronuc arg test of the spectrum.read_intensities() user function.""" 
171   
172          # Loop over the data types. 
173          for data in DATA_TYPES: 
174              # Catch the str argument, and skip it. 
175              if data[0] == 'str': 
176                  continue 
177   
178              # The argument test. 
179              self.assertRaises(RelaxStrError, self.spectrum_fns.read_intensities, heteronuc=data[1]) 
180   
181   
182 -    def test_read_intensities_argfail_proton(self): 
183          """The proton arg test of the spectrum.read_intensities() user function.""" 
184   
185          # Loop over the data types. 
186          for data in DATA_TYPES: 
187              # Catch the str argument, and skip it. 
188              if data[0] == 'str': 
189                  continue 
190   
191              # The argument test. 
192              self.assertRaises(RelaxStrError, self.spectrum_fns.read_intensities, proton=data[1]) 
193   
194   
195 -    def test_read_intensities_argfail_int_col(self): 
196          """The int_col arg test of the spectrum.read_intensities() user function.""" 
197   
198          # Loop over the data types. 
199          for data in DATA_TYPES: 
200              # Catch the None, int, bin, or integer list arguments, and skip them. 
201              if data[0] == 'None' or data[0] == 'int' or data[0] == 'bin' or data[0] == 'int list': 
202                  continue 
203   
204              # The argument test. 
205              self.assertRaises(RelaxNoneIntListIntError, self.spectrum_fns.read_intensities, file='a', spectrum_id='x', int_col=data[1]) 
206   
207   
208 -    def test_read_intensities_argfail_int_method(self): 
209          """The int_method arg test of the spectrum.read_intensities() user function.""" 
210   
211          # Loop over the data types. 
212          for data in DATA_TYPES: 
213              # Catch the str argument, and skip it. 
214              if data[0] == 'str': 
215                  continue 
216   
217              # The argument test. 
218              self.assertRaises(RelaxStrError, self.spectrum_fns.read_intensities, int_method=data[1]) 
219   
220   
221 -    def test_read_intensities_argfail_mol_name_col(self): 
222          """The mol_name_col arg test of the spectrum.read_intensities() user function.""" 
223   
224          # Loop over the data types. 
225          for data in DATA_TYPES: 
226              # Catch the None, int, and bin arguments, and skip them. 
227              if data[0] == 'None' or data[0] == 'int' or data[0] == 'bin': 
228                  continue 
229   
230              # The argument test. 
231              self.assertRaises(RelaxNoneIntError, self.spectrum_fns.read_intensities, file='a', spectrum_id='x', int_method='y', mol_name_col=data[1]) 
232   
233   
234 -    def test_read_intensities_argfail_res_num_col(self): 
235          """The res_num_col arg test of the spectrum.read_intensities() user function.""" 
236   
237          # Loop over the data types. 
238          for data in DATA_TYPES: 
239              # Catch the None, int, and bin arguments, and skip them. 
240              if data[0] == 'None' or data[0] == 'int' or data[0] == 'bin': 
241                  continue 
242   
243              # The argument test. 
244              self.assertRaises(RelaxNoneIntError, self.spectrum_fns.read_intensities, file='a', spectrum_id='x', int_method='y', res_num_col=data[1]) 
245   
246   
247 -    def test_read_intensities_argfail_res_name_col(self): 
248          """The res_name_col arg test of the spectrum.read_intensities() user function.""" 
249   
250          # Loop over the data types. 
251          for data in DATA_TYPES: 
252              # Catch the None, int, and bin arguments, and skip them. 
253              if data[0] == 'None' or data[0] == 'int' or data[0] == 'bin': 
254                  continue 
255   
256              # The argument test. 
257              self.assertRaises(RelaxNoneIntError, self.spectrum_fns.read_intensities, file='a', spectrum_id='x', int_method='y', res_name_col=data[1]) 
258   
259   
260 -    def test_read_intensities_argfail_spin_num_col(self): 
261          """The spin_num_col arg test of the spectrum.read_intensities() user function.""" 
262   
263          # Loop over the data types. 
264          for data in DATA_TYPES: 
265              # Catch the None, int, and bin arguments, and skip them. 
266              if data[0] == 'None' or data[0] == 'int' or data[0] == 'bin': 
267                  continue 
268   
269              # The argument test. 
270              self.assertRaises(RelaxNoneIntError, self.spectrum_fns.read_intensities, file='a', spectrum_id='x', int_method='y', spin_num_col=data[1]) 
271   
272   
273 -    def test_read_intensities_argfail_spin_name_col(self): 
274          """The spin_name_col arg test of the spectrum.read_intensities() user function.""" 
275   
276          # Loop over the data types. 
277          for data in DATA_TYPES: 
278              # Catch the None, int, and bin arguments, and skip them. 
279              if data[0] == 'None' or data[0] == 'int' or data[0] == 'bin': 
280                  continue 
281   
282              # The argument test. 
283              self.assertRaises(RelaxNoneIntError, self.spectrum_fns.read_intensities, file='a', spectrum_id='x', int_method='y', spin_name_col=data[1]) 
284   
285   
286 -    def test_read_intensities_argfail_sep(self): 
287          """The sep arg test of the spectrum.read_intensities() user function.""" 
288   
289          # Loop over the data types. 
290          for data in DATA_TYPES: 
291              # Catch the None and str arguments, and skip them. 
292              if data[0] == 'None' or data[0] == 'str': 
293                  continue 
294   
295              # The argument test. 
296              self.assertRaises(RelaxNoneStrError, self.spectrum_fns.read_intensities, file='a', spectrum_id='x', int_method='y', sep=data[1]) 
297