Source Code for Module test_suite.system_tests.value

 1  ############################################################################### 
 2  #                                                                             # 
 3  # Copyright (C) 2013 Edward d'Auvergne                                        # 
 4  #                                                                             # 
 5  # This file is part of the program relax (http://www.nmr-relax.com).          # 
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15  # GNU General Public License for more details.                                # 
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18  # along with this program.  If not, see <http://www.gnu.org/licenses/>.       # 
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20  ############################################################################### 
21   
22  # relax module imports. 
23  from data_store import Relax_data_store; ds = Relax_data_store() 
24  from test_suite.system_tests.base_classes import SystemTestCase 
25   
26   
27 -class Value(SystemTestCase): 
28      """Class for testing various aspects specific to the value user functions.""" 
29   
30 -    def setUp(self): 
31          """Set up for all the functional tests.""" 
32   
33          # Create the data pipe. 
34          self.interpreter.pipe.create('mf', 'mf') 
35   
36   
37 -    def test_value_copy(self): 
38          """Test the value.copy user function.""" 
39   
40          # Create a data pipe. 
41          self.interpreter.pipe.create('orig', 'mf') 
42   
43          # Add some new spins. 
44          self.interpreter.spin.create(mol_name='test mol', res_name='Gly', res_num=1, spin_name='N') 
45          self.interpreter.spin.create(mol_name='test mol', res_name='Gly', res_num=2, spin_name='N') 
46          self.interpreter.spin.create(mol_name='test mol', res_name='Gly', res_num=3, spin_name='N') 
47   
48          # Add some values and errors. 
49          self.interpreter.value.set(val=0.8, param='s2', spin_id=':1,2') 
50          self.interpreter.value.set(val=0.1, param='s2', spin_id=':1', error=True) 
51          self.interpreter.value.set(val=0.2, param='s2', spin_id=':2', error=True) 
52          self.interpreter.value.set(val=0.3, param='s2', spin_id=':3', error=True) 
53   
54          # Create a new data pipe. 
55          self.interpreter.pipe.create('new', 'mf') 
56   
57          # Copy the sequence data and value. 
58          self.interpreter.sequence.copy(pipe_from='orig', pipe_to='new') 
59          self.interpreter.value.copy(pipe_from='orig', pipe_to='new', param='s2') 
60   
61          # Loop over both the new and old pipes to check the data. 
62          for pipe in ['orig', 'new']: 
63              # Printout. 
64              print("Checking the values of the '%s' data pipe." % pipe) 
65   
66              # Check the values. 
67              self.assertEqual(ds[pipe].mol[0].res[0].spin[0].s2, 0.8) 
68              self.assertEqual(ds[pipe].mol[0].res[1].spin[0].s2, 0.8) 
69              self.assert_(not hasattr(ds[pipe].mol[0].res[2].spin[0], 's2')) 
70   
71              # Check the errors. 
72              self.assertEqual(ds[pipe].mol[0].res[0].spin[0].s2_err, 0.1) 
73              self.assertEqual(ds[pipe].mol[0].res[1].spin[0].s2_err, 0.2) 
74              self.assertEqual(ds[pipe].mol[0].res[2].spin[0].s2_err, 0.3) 
75