Class Peak_list

The object used to represent a peak list.

Instance Methods

new empty list __init__(self, dim=2)
Set up the object.

add(self, mol_names=None, res_nums=None, res_names=None, spin_nums=None, spin_names=None, shifts=None, intensity=None, intensity_name=None)
Add a peak list element.

Inherited from list: __add__, __contains__, __delitem__, __delslice__, __eq__, __ge__, __getattribute__, __getitem__, __getslice__, __gt__, __iadd__, __imul__, __iter__, __le__, __len__, __lt__, __mul__, __ne__, __new__, __repr__, __reversed__, __rmul__, __setitem__, __setslice__, __sizeof__, append, count, extend, index, insert, pop, remove, reverse, sort

Inherited from object: __delattr__, __format__, __reduce__, __reduce_ex__, __setattr__, __str__, __subclasshook__

Class Variables

Inherited from list: __hash__

Properties

Inherited from object: __class__

Method Details

__init__(self, dim=2)
(Constructor)

Set up the object.

Parameters:

• dim (int) - The dimensionality of the peak list.

Returns: new empty list

Overrides: object.__init__

add(self, mol_names=None, res_nums=None, res_names=None, spin_nums=None, spin_names=None, shifts=None, intensity=None, intensity_name=None)

Add a peak list element.

Parameters:

• mol_names (list of str or None) - The list of molecule names for each dimension of the assignment.
• res_nums (list of int or None) - The list of residue numbers for each dimension of the assignment.
• res_names (list of str or None) - The list of residue names for each dimension of the assignment.
• spin_nums (list of int or None) - The list of spin numbers for each dimension of the assignment.
• spin_names (list of str or None) - The list of spin names for each dimension of the assignment.
• shifts (list of float or None) - The chemical shifts for each dimension of the assignment in ppm.
• intensity (list of float or None) - The optional intensity value for the peak. This can have multiple values as some peak lists cover multiple spectra.
• intensity_name (list of str or None) - The optional name of the intensity column. This can be used for automated spectrum ID generation.