Author: bugman
Date: Sat Nov 4 09:47:11 2006
New Revision: 2744
URL: http://svn.gna.org/viewcvs/relax?rev=2744&view=rev
Log:
Updated the manual and changed the version number to 1.2.8.
Modified:
tags/1.2.8/docs/latex/docstring.tex
tags/1.2.8/docs/latex/relax_version.tex
tags/1.2.8/docs/relax.pdf
tags/1.2.8/version.py
Modified: tags/1.2.8/docs/latex/docstring.tex
URL:
http://svn.gna.org/viewcvs/relax/tags/1.2.8/docs/latex/docstring.tex?rev=2744&r1=2743&r2=2744&view=diff
==============================================================================
--- tags/1.2.8/docs/latex/docstring.tex (original)
+++ tags/1.2.8/docs/latex/docstring.tex Sat Nov 4 09:47:11 2006
@@ -1164,11 +1164,11 @@
\toprule
Data type & Object name & Patterns \\
\midrule
- $J(0)$ & \quotecmd{j0} & \quotecmd{\^{}[Jj]0\$} or \quotecmd{[Jj](0)} \\
- & & \\
- $J(\omega_X)$ & \quotecmd{jwx} & \quotecmd{\^{}[Jj]w[Xx]\$} or
\quotecmd{[Jj](w[Xx])} \\
- & & \\
- $J(\omega_H)$ & \quotecmd{jwh} & \quotecmd{\^{}[Jj]w[Hh]\$} or
\quotecmd{[Jj](w[Hh])} \\
+ $J(0)$ & \quotecmd{j0} & \quotecmd{\^{}[Jj]0\$} or
\quotecmd{[Jj]$\backslash$(0$\backslash$)} \\
+ & & \\
+ $J(\omega_X)$ & \quotecmd{jwx} & \quotecmd{\^{}[Jj]w[Xx]\$} or
\quotecmd{[Jj]$\backslash$(w[Xx]$\backslash$)} \\
+ & & \\
+ $J(\omega_H)$ & \quotecmd{jwh} & \quotecmd{\^{}[Jj]w[Hh]\$} or
\quotecmd{[Jj]$\backslash$(w[Hh]$\backslash$)} \\
& & \\
Bond\index{bond length} length & \quotecmd{r} & \quotecmd{\^{}r\$} or
\quotecmd{[Bb]ond[ -\_][Ll]ength} \\
& & \\
@@ -1677,6 +1677,9 @@
\bottomrule
\end{tabular}
\end{center}
+
+
+ As both the line search algorithm and Hessian modification can be specified
for Newton\index{minimisation techniques!Newton} optimisation, supplying the
option \quotecmd{None} may appear to be ambiguous. In fact, the Hessian
takes precedence over the line search. Hence supplying the option
\quotecmd{None} with the Newton\index{minimisation techniques!Newton}
algorithm selects the unmodified Hessian. Supplying \quotecmd{None} twice
will turn off the Hessian modification and no step length selection (or line
search) will be performed.
Hessian type, these are used in a few of the trust region methods including
the Dogleg\index{minimisation techniques!dogleg} and Exact\index{minimisation
techniques!exact trust region} trust region algorithms. In these cases, when
the Hessian type is set to Newton,\index{minimisation techniques!Newton} a
Hessian modification can also be supplied as above. The default Hessian type
is Newton,\index{minimisation techniques!Newton} and the default Hessian
modification when Newton\index{minimisation techniques!Newton} is selected is
the GMW algorithm.
@@ -5765,11 +5768,11 @@
\toprule
Data type & Object name & Patterns \\
\midrule
- $J(0)$ & \quotecmd{j0} & \quotecmd{\^{}[Jj]0\$} or \quotecmd{[Jj](0)} \\
- & & \\
- $J(\omega_X)$ & \quotecmd{jwx} & \quotecmd{\^{}[Jj]w[Xx]\$} or
\quotecmd{[Jj](w[Xx])} \\
- & & \\
- $J(\omega_H)$ & \quotecmd{jwh} & \quotecmd{\^{}[Jj]w[Hh]\$} or
\quotecmd{[Jj](w[Hh])} \\
+ $J(0)$ & \quotecmd{j0} & \quotecmd{\^{}[Jj]0\$} or
\quotecmd{[Jj]$\backslash$(0$\backslash$)} \\
+ & & \\
+ $J(\omega_X)$ & \quotecmd{jwx} & \quotecmd{\^{}[Jj]w[Xx]\$} or
\quotecmd{[Jj]$\backslash$(w[Xx]$\backslash$)} \\
+ & & \\
+ $J(\omega_H)$ & \quotecmd{jwh} & \quotecmd{\^{}[Jj]w[Hh]\$} or
\quotecmd{[Jj]$\backslash$(w[Hh]$\backslash$)} \\
& & \\
Bond\index{bond length} length & \quotecmd{r} & \quotecmd{\^{}r\$} or
\quotecmd{[Bb]ond[ -\_][Ll]ength} \\
& & \\
@@ -5905,11 +5908,11 @@
\toprule
Data type & Object name & Patterns \\
\midrule
- $J(0)$ & \quotecmd{j0} & \quotecmd{\^{}[Jj]0\$} or \quotecmd{[Jj](0)} \\
- & & \\
- $J(\omega_X)$ & \quotecmd{jwx} & \quotecmd{\^{}[Jj]w[Xx]\$} or
\quotecmd{[Jj](w[Xx])} \\
- & & \\
- $J(\omega_H)$ & \quotecmd{jwh} & \quotecmd{\^{}[Jj]w[Hh]\$} or
\quotecmd{[Jj](w[Hh])} \\
+ $J(0)$ & \quotecmd{j0} & \quotecmd{\^{}[Jj]0\$} or
\quotecmd{[Jj]$\backslash$(0$\backslash$)} \\
+ & & \\
+ $J(\omega_X)$ & \quotecmd{jwx} & \quotecmd{\^{}[Jj]w[Xx]\$} or
\quotecmd{[Jj]$\backslash$(w[Xx]$\backslash$)} \\
+ & & \\
+ $J(\omega_H)$ & \quotecmd{jwh} & \quotecmd{\^{}[Jj]w[Hh]\$} or
\quotecmd{[Jj]$\backslash$(w[Hh]$\backslash$)} \\
& & \\
Bond\index{bond length} length & \quotecmd{r} & \quotecmd{\^{}r\$} or
\quotecmd{[Bb]ond[ -\_][Ll]ength} \\
& & \\
@@ -6092,11 +6095,11 @@
\toprule
Data type & Object name & Patterns \\
\midrule
- $J(0)$ & \quotecmd{j0} & \quotecmd{\^{}[Jj]0\$} or \quotecmd{[Jj](0)} \\
- & & \\
- $J(\omega_X)$ & \quotecmd{jwx} & \quotecmd{\^{}[Jj]w[Xx]\$} or
\quotecmd{[Jj](w[Xx])} \\
- & & \\
- $J(\omega_H)$ & \quotecmd{jwh} & \quotecmd{\^{}[Jj]w[Hh]\$} or
\quotecmd{[Jj](w[Hh])} \\
+ $J(0)$ & \quotecmd{j0} & \quotecmd{\^{}[Jj]0\$} or
\quotecmd{[Jj]$\backslash$(0$\backslash$)} \\
+ & & \\
+ $J(\omega_X)$ & \quotecmd{jwx} & \quotecmd{\^{}[Jj]w[Xx]\$} or
\quotecmd{[Jj]$\backslash$(w[Xx]$\backslash$)} \\
+ & & \\
+ $J(\omega_H)$ & \quotecmd{jwh} & \quotecmd{\^{}[Jj]w[Hh]\$} or
\quotecmd{[Jj]$\backslash$(w[Hh]$\backslash$)} \\
& & \\
Bond\index{bond length} length & \quotecmd{r} & \quotecmd{\^{}r\$} or
\quotecmd{[Bb]ond[ -\_][Ll]ength} \\
& & \\
@@ -6386,11 +6389,11 @@
\toprule
Data type & Object name & Patterns \\
\midrule
- $J(0)$ & \quotecmd{j0} & \quotecmd{\^{}[Jj]0\$} or \quotecmd{[Jj](0)} \\
- & & \\
- $J(\omega_X)$ & \quotecmd{jwx} & \quotecmd{\^{}[Jj]w[Xx]\$} or
\quotecmd{[Jj](w[Xx])} \\
- & & \\
- $J(\omega_H)$ & \quotecmd{jwh} & \quotecmd{\^{}[Jj]w[Hh]\$} or
\quotecmd{[Jj](w[Hh])} \\
+ $J(0)$ & \quotecmd{j0} & \quotecmd{\^{}[Jj]0\$} or
\quotecmd{[Jj]$\backslash$(0$\backslash$)} \\
+ & & \\
+ $J(\omega_X)$ & \quotecmd{jwx} & \quotecmd{\^{}[Jj]w[Xx]\$} or
\quotecmd{[Jj]$\backslash$(w[Xx]$\backslash$)} \\
+ & & \\
+ $J(\omega_H)$ & \quotecmd{jwh} & \quotecmd{\^{}[Jj]w[Hh]\$} or
\quotecmd{[Jj]$\backslash$(w[Hh]$\backslash$)} \\
& & \\
Bond\index{bond length} length & \quotecmd{r} & \quotecmd{\^{}r\$} or
\quotecmd{[Bb]ond[ -\_][Ll]ength} \\
& & \\
@@ -6726,11 +6729,11 @@
\toprule
Data type & Object name & Patterns \\
\midrule
- $J(0)$ & \quotecmd{j0} & \quotecmd{\^{}[Jj]0\$} or \quotecmd{[Jj](0)} \\
- & & \\
- $J(\omega_X)$ & \quotecmd{jwx} & \quotecmd{\^{}[Jj]w[Xx]\$} or
\quotecmd{[Jj](w[Xx])} \\
- & & \\
- $J(\omega_H)$ & \quotecmd{jwh} & \quotecmd{\^{}[Jj]w[Hh]\$} or
\quotecmd{[Jj](w[Hh])} \\
+ $J(0)$ & \quotecmd{j0} & \quotecmd{\^{}[Jj]0\$} or
\quotecmd{[Jj]$\backslash$(0$\backslash$)} \\
+ & & \\
+ $J(\omega_X)$ & \quotecmd{jwx} & \quotecmd{\^{}[Jj]w[Xx]\$} or
\quotecmd{[Jj]$\backslash$(w[Xx]$\backslash$)} \\
+ & & \\
+ $J(\omega_H)$ & \quotecmd{jwh} & \quotecmd{\^{}[Jj]w[Hh]\$} or
\quotecmd{[Jj]$\backslash$(w[Hh]$\backslash$)} \\
& & \\
Bond\index{bond length} length & \quotecmd{r} & \quotecmd{\^{}r\$} or
\quotecmd{[Bb]ond[ -\_][Ll]ength} \\
& & \\
Modified: tags/1.2.8/docs/latex/relax_version.tex
URL:
http://svn.gna.org/viewcvs/relax/tags/1.2.8/docs/latex/relax_version.tex?rev=2744&r1=2743&r2=2744&view=diff
==============================================================================
--- tags/1.2.8/docs/latex/relax_version.tex (original)
+++ tags/1.2.8/docs/latex/relax_version.tex Sat Nov 4 09:47:11 2006
@@ -1,1 +1,1 @@
-Version repository checkout
+Version 1.2.8
Modified: tags/1.2.8/docs/relax.pdf
URL:
http://svn.gna.org/viewcvs/relax/tags/1.2.8/docs/relax.pdf?rev=2744&r1=2743&r2=2744&view=diff
==============================================================================
Binary files - no diff available.
Modified: tags/1.2.8/version.py
URL:
http://svn.gna.org/viewcvs/relax/tags/1.2.8/version.py?rev=2744&r1=2743&r2=2744&view=diff
==============================================================================
--- tags/1.2.8/version.py (original)
+++ tags/1.2.8/version.py Sat Nov 4 09:47:11 2006
@@ -1,1 +1,1 @@
-version = "repository checkout"
+version = "1.2.8"
r2744 - in /tags/1.2.8: docs/latex/docstring.tex docs/latex/relax_version.tex docs/relax.pdf version.py