r3826 - /1.3/generic_fns/sequence.py -- November 22, 2007 - 17:50

Author: bugman
Date: Thu Nov 22 17:50:39 2007
New Revision: 3826

URL: http://svn.gna.org/viewcvs/relax?rev=3826&view=rev
Log:
Bug fix for the generic_fns.sequence.validate_sequence() function.


Modified:
    1.3/generic_fns/sequence.py

Modified: 1.3/generic_fns/sequence.py
URL: 
http://svn.gna.org/viewcvs/relax/1.3/generic_fns/sequence.py?rev=3826&r1=3825&r2=3826&view=diff
==============================================================================
--- 1.3/generic_fns/sequence.py (original)
+++ 1.3/generic_fns/sequence.py Thu Nov 22 17:50:39 2007
@@ -123,55 +123,55 @@
     """
 
     # Loop over the data.
-    for i in xrange(len(file_data)):
+    for i in xrange(len(data)):
         # Molecule name data.
         if mol_name_col != None:
             try:
-                file_data[i][mol_name_col]
-            except IndexError:
-                raise RelaxInvalidSeqError, file_data[i]
+                data[i][mol_name_col]
+            except IndexError:
+                raise RelaxInvalidSeqError, data[i]
 
         # Residue number data.
         if res_num_col != None:
             # No data in column.
             try:
-                file_data[i][res_num_col]
-            except IndexError:
-                raise RelaxInvalidSeqError, file_data[i]
+                data[i][res_num_col]
+            except IndexError:
+                raise RelaxInvalidSeqError, data[i]
 
             # Bad data in column.
             try:
-                int(file_data[i][res_num_col])
+                int(data[i][res_num_col])
             except ValueError:
-                raise RelaxInvalidSeqError, file_data[i]
+                raise RelaxInvalidSeqError, data[i]
 
         # Residue name data.
         if res_name_col != None:
             try:
-                file_data[i][res_name_col]
-            except IndexError:
-                raise RelaxInvalidSeqError, file_data[i]
+                data[i][res_name_col]
+            except IndexError:
+                raise RelaxInvalidSeqError, data[i]
 
         # Spin number data.
         if spin_num_col != None:
             # No data in column.
             try:
-                file_data[i][spin_num_col]
-            except IndexError:
-                raise RelaxInvalidSeqError, file_data[i]
+                data[i][spin_num_col]
+            except IndexError:
+                raise RelaxInvalidSeqError, data[i]
 
             # Bad data in column.
             try:
-                int(file_data[i][spin_num_col])
+                int(data[i][spin_num_col])
             except ValueError:
-                raise RelaxInvalidSeqError, file_data[i]
+                raise RelaxInvalidSeqError, data[i]
 
         # Spin name data.
         if spin_name_col != None:
             try:
-                file_data[i][spin_name_col]
-            except IndexError:
-                raise RelaxInvalidSeqError, file_data[i]
+                data[i][spin_name_col]
+            except IndexError:
+                raise RelaxInvalidSeqError, data[i]