r3845 - /1.3/generic_fns/sequence.py -- November 23, 2007 - 15:38

Author: bugman
Date: Fri Nov 23 15:29:47 2007
New Revision: 3845

URL: http://svn.gna.org/viewcvs/relax?rev=3845&view=rev
Log:
Converted the diplay() class method to a module function.


Modified:
    1.3/generic_fns/sequence.py

Modified: 1.3/generic_fns/sequence.py
URL: 
http://svn.gna.org/viewcvs/relax/1.3/generic_fns/sequence.py?rev=3845&r1=3844&r2=3845&view=diff
==============================================================================
--- 1.3/generic_fns/sequence.py (original)
+++ 1.3/generic_fns/sequence.py Fri Nov 23 15:29:47 2007
@@ -25,6 +25,21 @@
 from relax_errors import RelaxError, RelaxFileEmptyError, 
RelaxNoPdbChainError, RelaxNoPipeError, RelaxNoSequenceError, 
RelaxSequenceError
 from relax_io import extract_data, strip
 
+
+
+def display(run=None):
+    """Function for displaying the sequence."""
+
+    # Test if the sequence data is loaded.
+    if not relax_data_store.res.has_key(run):
+        raise RelaxNoSequenceError, run
+
+    # Print a header.
+    print "%-8s%-8s%-10s" % ("Number", "Name", "Selected")
+
+    # Print the sequence.
+    for i in xrange(len(relax_data_store.res[run])):
+        print "%-8i%-8s%-10i" % (relax_data_store.res[run][i].num, 
relax_data_store.res[run][i].name, relax_data_store.res[run][i].select)
 
 
 def read(file=None, dir=None, mol_name_col=None, res_num_col=0, 
res_name_col=1, spin_num_col=None, spin_name_col=None, sep=None):
@@ -225,25 +240,6 @@
         self.relax = relax
 
 
-    def display(self, run=None):
-        """Function for displaying the sequence."""
-
-        # Test if the run exists.
-        if not run in relax_data_store.run_names:
-            raise RelaxNoPipeError, run
-
-        # Test if the sequence data is loaded.
-        if not relax_data_store.res.has_key(run):
-            raise RelaxNoSequenceError, run
-
-        # Print a header.
-        print "%-8s%-8s%-10s" % ("Number", "Name", "Selected")
-
-        # Print the sequence.
-        for i in xrange(len(relax_data_store.res[run])):
-            print "%-8i%-8s%-10i" % (relax_data_store.res[run][i].num, 
relax_data_store.res[run][i].name, relax_data_store.res[run][i].select)
-
-
     def load_PDB_sequence(self, run=None):
         """Function for loading the sequence out of a PDB file.