mailr3946 - /1.3/generic_fns/diffusion_tensor.py


Others Months | Index by Date | Thread Index
>>   [Date Prev] [Date Next] [Thread Prev] [Thread Next]

Header


Content

Posted by edward on November 25, 2007 - 19:52:
Author: bugman
Date: Sun Nov 25 19:52:48 2007
New Revision: 3946

URL: http://svn.gna.org/viewcvs/relax?rev=3946&view=rev
Log:
Converted the docstring of generic_fns.diffusion_tensor.init() to the epydoc 
format.


Modified:
    1.3/generic_fns/diffusion_tensor.py

Modified: 1.3/generic_fns/diffusion_tensor.py
URL: 
http://svn.gna.org/viewcvs/relax/1.3/generic_fns/diffusion_tensor.py?rev=3946&r1=3945&r2=3946&view=diff
==============================================================================
--- 1.3/generic_fns/diffusion_tensor.py (original)
+++ 1.3/generic_fns/diffusion_tensor.py Sun Nov 25 19:52:48 2007
@@ -469,7 +469,30 @@
 
 
 def init(params=None, time_scale=1.0, d_scale=1.0, angle_units='deg', 
param_types=0, spheroid_type=None, fixed=1):
-    """Function for initialising the diffusion tensor."""
+    """Function for initialising the diffusion tensor.
+
+    @param params:          The diffusion tensor parameters.
+    @type params:           float
+    @param time_scale:      The correlation time scaling value.
+    @type time_scale:       float
+    @param d_scale:         The diffusion tensor eigenvalue scaling value.
+    @type d_scale:          float
+    @param angle_units:     The units for the angle parameters.
+    @type angle_units:      str (either 'deg' or 'rad')
+    @param param_types:     The type of parameters supplied.  For spherical 
diffusion, the flag
+                            values correspond to 0: tm, 1: Diso.  For 
spheroidal diffusion, 0: {tm,
+                            Da, theta, phi}, 1: {Diso, Da, theta, phi}, 2: 
{tm, Dratio, theta, phi},
+                            3:  {Dpar, Dper, theta, phi}, 4: {Diso, Dratio, 
theta, phi}.  For
+                            ellipsoidal diffusion, 0: {tm, Da, Dr, alpha, 
beta, gamma}, 1: {Diso,
+                            Da, Dr, alpha, beta, gamma}, 2: {Dx, Dy, Dz, 
alpha, beta, gamma}.
+    @type param_types:      int
+    @param spheroid_type:   A string which, if supplied together with 
spheroid parameters, will
+                            restrict the tensor to either being 'oblate' or 
'prolate'.
+    @type spheroid_type:    str
+    @param fixed:           A flag specifying whether the diffusion tensor 
is fixed or can be
+                            optimised.
+    @type fixed:            bin
+    """
 
     # Test if the current data pipe exists.
     pipes.test(relax_data_store.current_pipe)




Related Messages


Powered by MHonArc, Updated Sun Nov 25 20:00:16 2007