Author: bugman
Date: Wed Jan 2 16:59:36 2008
New Revision: 4258
URL: http://svn.gna.org/viewcvs/relax?rev=4258&view=rev
Log:
Added 10 unit tests for the setting of spin specific model-free parameter
values.
Modified:
1.3/test_suite/unit_tests/value_testing_base.py
Modified: 1.3/test_suite/unit_tests/value_testing_base.py
URL:
http://svn.gna.org/viewcvs/relax/1.3/test_suite/unit_tests/value_testing_base.py?rev=4258&r1=4257&r2=4258&view=diff
==============================================================================
--- 1.3/test_suite/unit_tests/value_testing_base.py (original)
+++ 1.3/test_suite/unit_tests/value_testing_base.py Wed Jan 2 16:59:36 2008
@@ -47,9 +47,6 @@
# Set up some spins.
self.set_up_spins(pipe_name='mf')
-
- # Set the current data pipe to 'mf'.
- relax_data_store.current_pipe = 'mf'
def tearDown(self):
@@ -80,3 +77,203 @@
pipe.mol[0].res.add_item('Trp', 2)
pipe.mol[0].res[1].spin[0].num = 112
pipe.mol[0].res[1].spin[0].name = 'NH'
+
+
+ def test_set_mf_single_spin_local_tm(self):
+ """Set the model-free local tm parameter for a single spin.
+
+ The functions tested are both generic_fns.value.set() and
prompt.value.set().
+ """
+
+ # Set the current data pipe to 'mf'.
+ relax_data_store.current_pipe = 'mf'
+
+ # Alias the current data pipe.
+ cdp = relax_data_store[relax_data_store.current_pipe]
+
+ # Set the parameter.
+ self.value_fns.set(param='local tm', val=1e-8, spin_id=':112')
+
+ # Test the parameter.
+ self.assert_(not hasattr(cdp.mol[0].res[0].spin[0], 'local_tm')
+ self.assertEqual(cdp.mol[0].res[1].spin[0].local_tm, 1e-8)
+
+
+ def test_set_mf_single_spin_s2(self):
+ """Set the model-free S2 parameter for a single spin.
+
+ The functions tested are both generic_fns.value.set() and
prompt.value.set().
+ """
+
+ # Set the current data pipe to 'mf'.
+ relax_data_store.current_pipe = 'mf'
+
+ # Alias the current data pipe.
+ cdp = relax_data_store[relax_data_store.current_pipe]
+
+ # Set the parameter.
+ self.value_fns.set(param='S2', val=0.8, spin_id=':112')
+
+ # Test the parameter.
+ self.assert_(not hasattr(cdp.mol[0].res[0].spin[0], 's2')
+ self.assertEqual(cdp.mol[0].res[1].spin[0].s2, 0.8)
+
+
+ def test_set_mf_single_spin_s2f(self):
+ """Set the model-free S2f parameter for a single spin.
+
+ The functions tested are both generic_fns.value.set() and
prompt.value.set().
+ """
+
+ # Set the current data pipe to 'mf'.
+ relax_data_store.current_pipe = 'mf'
+
+ # Alias the current data pipe.
+ cdp = relax_data_store[relax_data_store.current_pipe]
+
+ # Set the parameter.
+ self.value_fns.set(param='S2f', val=0.45, spin_id=':112')
+
+ # Test the parameter.
+ self.assert_(not hasattr(cdp.mol[0].res[0].spin[0], 's2f')
+ self.assertEqual(cdp.mol[0].res[1].spin[0].s2f, 0.45)
+
+
+ def test_set_mf_single_spin_s2s(self):
+ """Set the model-free S2s parameter for a single spin.
+
+ The functions tested are both generic_fns.value.set() and
prompt.value.set().
+ """
+
+ # Set the current data pipe to 'mf'.
+ relax_data_store.current_pipe = 'mf'
+
+ # Alias the current data pipe.
+ cdp = relax_data_store[relax_data_store.current_pipe]
+
+ # Set the parameter.
+ self.value_fns.set(param='S2s', val=0.1, spin_id=':112')
+
+ # Test the parameter.
+ self.assert_(not hasattr(cdp.mol[0].res[0].spin[0], 's2s')
+ self.assertEqual(cdp.mol[0].res[1].spin[0].s2s, 0.1)
+
+
+ def test_set_mf_single_spin_te(self):
+ """Set the model-free te parameter for a single spin.
+
+ The functions tested are both generic_fns.value.set() and
prompt.value.set().
+ """
+
+ # Set the current data pipe to 'mf'.
+ relax_data_store.current_pipe = 'mf'
+
+ # Alias the current data pipe.
+ cdp = relax_data_store[relax_data_store.current_pipe]
+
+ # Set the parameter.
+ self.value_fns.set(param='te', val=12.5e-12, spin_id=':112')
+
+ # Test the parameter.
+ self.assert_(not hasattr(cdp.mol[0].res[0].spin[0], 'te')
+ self.assertEqual(cdp.mol[0].res[1].spin[0].te, 12.5e-12)
+
+
+ def test_set_mf_single_spin_tf(self):
+ """Set the model-free tf parameter for a single spin.
+
+ The functions tested are both generic_fns.value.set() and
prompt.value.set().
+ """
+
+ # Set the current data pipe to 'mf'.
+ relax_data_store.current_pipe = 'mf'
+
+ # Alias the current data pipe.
+ cdp = relax_data_store[relax_data_store.current_pipe]
+
+ # Set the parameter.
+ self.value_fns.set(param='tf', val=20.1e-12, spin_id=':112')
+
+ # Test the parameter.
+ self.assert_(not hasattr(cdp.mol[0].res[0].spin[0], 'tf')
+ self.assertEqual(cdp.mol[0].res[1].spin[0].tf, 20.1e-12)
+
+
+ def test_set_mf_single_spin_ts(self):
+ """Set the model-free ts parameter for a single spin.
+
+ The functions tested are both generic_fns.value.set() and
prompt.value.set().
+ """
+
+ # Set the current data pipe to 'mf'.
+ relax_data_store.current_pipe = 'mf'
+
+ # Alias the current data pipe.
+ cdp = relax_data_store[relax_data_store.current_pipe]
+
+ # Set the parameter.
+ self.value_fns.set(param='ts', val=1.23e-9, spin_id=':112')
+
+ # Test the parameter.
+ self.assert_(not hasattr(cdp.mol[0].res[0].spin[0], 'ts')
+ self.assertEqual(cdp.mol[0].res[1].spin[0].ts, 1.23e-9)
+
+
+ def test_set_mf_single_spin_rex(self):
+ """Set the model-free Rex parameter for a single spin.
+
+ The functions tested are both generic_fns.value.set() and
prompt.value.set().
+ """
+
+ # Set the current data pipe to 'mf'.
+ relax_data_store.current_pipe = 'mf'
+
+ # Alias the current data pipe.
+ cdp = relax_data_store[relax_data_store.current_pipe]
+
+ # Set the parameter.
+ self.value_fns.set(param='Rex', val=2.34, spin_id=':112')
+
+ # Test the parameter.
+ self.assert_(not hasattr(cdp.mol[0].res[0].spin[0], 'rex')
+ self.assertEqual(cdp.mol[0].res[1].spin[0].rex, 2.34)
+
+
+ def test_set_mf_single_spin_r(self):
+ """Set the model-free bond length parameter for a single spin.
+
+ The functions tested are both generic_fns.value.set() and
prompt.value.set().
+ """
+
+ # Set the current data pipe to 'mf'.
+ relax_data_store.current_pipe = 'mf'
+
+ # Alias the current data pipe.
+ cdp = relax_data_store[relax_data_store.current_pipe]
+
+ # Set the parameter.
+ self.value_fns.set(param='Bond length', val=1.02e-10, spin_id=':112')
+
+ # Test the parameter.
+ self.assert_(not hasattr(cdp.mol[0].res[0].spin[0], 'r')
+ self.assertEqual(cdp.mol[0].res[1].spin[0].r, 1.02e-10)
+
+
+ def test_set_mf_single_spin_csa(self):
+ """Set the model-free CSA parameter for a single spin.
+
+ The functions tested are both generic_fns.value.set() and
prompt.value.set().
+ """
+
+ # Set the current data pipe to 'mf'.
+ relax_data_store.current_pipe = 'mf'
+
+ # Alias the current data pipe.
+ cdp = relax_data_store[relax_data_store.current_pipe]
+
+ # Set the parameter.
+ self.value_fns.set(param='CSA', val=-172e-6, spin_id=':112')
+
+ # Test the parameter.
+ self.assert_(not hasattr(cdp.mol[0].res[0].spin[0], 'csa')
+ self.assertEqual(cdp.mol[0].res[1].spin[0].csa, -172e-6)
r4258 - /1.3/test_suite/unit_tests/value_testing_base.py