mailr4870 - /branches/N_state_model/specific_fns/n_state_model.py


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Posted by edward on January 21, 2008 - 15:10:
Author: bugman
Date: Mon Jan 21 15:10:14 2008
New Revision: 4870

URL: http://svn.gna.org/viewcvs/relax?rev=4870&view=rev
Log:
Rewrote the return_data_name() method to handle the N-state model parameters.


Modified:
    branches/N_state_model/specific_fns/n_state_model.py

Modified: branches/N_state_model/specific_fns/n_state_model.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/N_state_model/specific_fns/n_state_model.py?rev=4870&r1=4869&r2=4870&view=diff
==============================================================================
--- branches/N_state_model/specific_fns/n_state_model.py (original)
+++ branches/N_state_model/specific_fns/n_state_model.py Mon Jan 21 15:10:14 
2008
@@ -511,31 +511,83 @@
         return (cdp.N - 1) + cdp.N*3
 
 
-    def return_data_name(self, name):
+    def return_data_name(self, name, index=False):
         """
         N-state model data type string matching patterns
         ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
 
         
____________________________________________________________________________________________
-        |                        |              |                            
                      |
-        | Data type              | Object name  | Patterns                   
                      |
-        
|________________________|______________|__________________________________________________|
-        |                        |              |                            
                      |
-        | Bond length            | 'r'          | '^r$' or '[Bb]ond[ 
-_][Ll]ength'                 |
-        |                        |              |                            
                      |
-        | CSA                    | 'csa'        | '^[Cc][Ss][Aa]$'           
                      |
-        
|________________________|______________|__________________________________________________|
+        |                        |                             |             
                      |
+        | Data type              | Object name                 | Patterns    
                      |
+        
|________________________|_____________________________|___________________________________|
+        |                        |                             |             
                      |
+        | Probabilities          | 'p0', 'p1', 'p2', ..., 'pN' | 'p0', 'p1', 
'p2', ..., 'pN'       |
+        |                        |                             |             
                      |
+        | Euler angle alpha      | 'alpha0', 'alpha1', ...     | 'alpha0', 
'alpha1', ...           |
+        |                        |                             |             
                      |
+        | Euler angle beta       | 'beta0', 'beta1', ...       | 'beta0', 
'beta1', ...             |
+        |                        |                             |             
                      |
+        | Euler angle gamma      | 'gamma0', 'gamma1', ...     | 'gamma0', 
'gamma1', ...           |
+        
|________________________|_____________________________|___________________________________|
 
         """
         __docformat__ = "plaintext"
 
-        # Bond length.
-        if search('^r$', name) or search('[Bb]ond[ -_][Ll]ength', name):
-            return 'r'
-
-        # CSA.
-        if search('^[Cc][Ss][Aa]$', name):
-            return 'csa'
+        # Probability.
+        if search('^p', name):
+            # Get the state index, otherwise return with nothing if there is 
an error (parameter unknown).
+            try:
+                i = int(name[1:])
+            except ValueError:
+                return
+
+            # Return the name (and maybe index).
+            if index:
+                return 'p', i
+            else:
+                return 'p'
+
+        # Alpha Euler angle.
+        if search('^alpha', name):
+            # Get the state index, otherwise return with nothing if there is 
an error (parameter unknown).
+            try:
+                i = int(name[5:])
+            except ValueError:
+                return
+
+            # Return the name (and maybe index).
+            if index:
+                return 'alpha', i
+            else:
+                return 'alpha'
+
+        # Beta Euler angle.
+        if search('^beta', name):
+            # Get the state index, otherwise return with nothing if there is 
an error (parameter unknown).
+            try:
+                i = int(name[5:])
+            except ValueError:
+                return
+
+            # Return the name (and maybe index).
+            if index:
+                return 'beta', i
+            else:
+                return 'beta'
+
+        # Gamma Euler angle.
+        if search('^gamma', name):
+            # Get the state index, otherwise return with nothing if there is 
an error (parameter unknown).
+            try:
+                i = int(name[5:])
+            except ValueError:
+                return
+
+            # Return the name (and maybe index).
+            if index:
+                return 'gamma', i
+            else:
+                return 'gamma'
 
 
     def set_doc(self):




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