mailr4916 - /1.3/generic_fns/molmol.py


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Posted by edward on February 07, 2008 - 11:08:
Author: bugman
Date: Thu Feb  7 11:08:02 2008
New Revision: 4916

URL: http://svn.gna.org/viewcvs/relax?rev=4916&view=rev
Log:
Converted the Molmol open_pdb() function to the new relax design.


Modified:
    1.3/generic_fns/molmol.py

Modified: 1.3/generic_fns/molmol.py
URL: 
http://svn.gna.org/viewcvs/relax/1.3/generic_fns/molmol.py?rev=4916&r1=4915&r2=4916&view=diff
==============================================================================
--- 1.3/generic_fns/molmol.py (original)
+++ 1.3/generic_fns/molmol.py Thu Feb  7 11:08:02 2008
@@ -110,12 +110,8 @@
         pipe_write(command)
 
 
-def open_pdb(run=None):
+def open_pdb():
     """Function for opening the PDB file in Molmol."""
-
-    # Argument.
-    if run:
-        run = run
 
     # Test if the pipe is open.
     if not pipe_open_test():
@@ -125,7 +121,7 @@
     pipe_write("InitAll yes")
 
     # Open the PDB.
-    pipe_write("ReadPdb " + relax_data_store.pdb[run].file_name)
+    pipe_write("ReadPdb " + 
relax_data_store[relax_data_store.current_pipe].structure.file_name)
 
 
 def pipe_open():




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