r5133 - in /website: features.html refs.html -- March 21, 2008 - 21:02

Author: bugman
Date: Fri Mar 21 20:17:06 2008
New Revision: 5133

URL: http://svn.gna.org/viewcvs/relax?rev=5133&view=rev
Log:
Added the Chen et al, 2004 reference.


Modified:
    website/features.html
    website/refs.html

Modified: website/features.html
URL: 
http://svn.gna.org/viewcvs/relax/website/features.html?rev=5133&r1=5132&r2=5133&view=diff
==============================================================================
--- website/features.html (original)
+++ website/features.html Fri Mar 21 20:17:06 2008
@@ -70,7 +70,7 @@
    <h2>Literature</h2>
     <p>The primary references for the program relax are <a 
href="refs.html#dAuvergneGooley08a">d'Auvergne and Gooley, 2008a</a> and <a 
href="refs.html#dAuvergneGooley08b">d'Auvergne and Gooley, 2008b</a>.</p>
 
-    <p>Other literature related to the improved model-free analysis used 
within relax, which can nevertheless be applied to other techniques such as 
SRLS, include model-free model selection (<a 
href="refs.html#dAuvergneGooley03">d'Auvergne and Gooley, 2003</a>), 
model-free model elimination (<a 
href="refs.html#dAuvergneGooley06">d'Auvergne and Gooley, 2006</a>), the 
theory (<a href="refs.html#dAuvergneGooley07">d'Auvergne and Gooley, 
2007</a>) behind the new model-free optimisation protocol (<a 
href="refs.html#dAuvergneGooley08b">d'Auvergne and Gooley, 2008b</a>), and 
the hybridisation of different models (<a href="refs.html#Horne07">Horne et 
al., 2007</a>; <a href="refs.html#dAuvergneGooley08b">d'Auvergne and Gooley, 
2008b</a>).  Most of these details can be found in the PhD thesis of <a 
href="refs.html#dAuvergne06">d'Auvergne, 2006</a>.</p>
+    <p>Other literature related to the improved model-free analysis used 
within relax, which can nevertheless be applied to other techniques such as 
SRLS, include model-free model selection (<a 
href="refs.html#dAuvergneGooley03">d'Auvergne and Gooley, 2003</a>; <a 
href="refs.html#Chen04">Chen et al., 2004</a>), model-free model elimination 
(<a href="refs.html#dAuvergneGooley06">d'Auvergne and Gooley, 2006</a>), the 
theory (<a href="refs.html#dAuvergneGooley07">d'Auvergne and Gooley, 
2007</a>) behind the new model-free optimisation protocol (<a 
href="refs.html#dAuvergneGooley08b">d'Auvergne and Gooley, 2008b</a>), and 
the hybridisation of different models (<a href="refs.html#Horne07">Horne et 
al., 2007</a>; <a href="refs.html#dAuvergneGooley08b">d'Auvergne and Gooley, 
2008b</a>).  Most of these details can be found in the PhD thesis of <a 
href="refs.html#dAuvergne06">d'Auvergne, 2006</a>.</p>
 
 
   </div>
@@ -100,7 +100,7 @@
 
     <ul>
      <li>Numerous high-precision optimisation algorithms</li>
-     <li>Model selection (<a href="refs.html#dAuvergneGooley03">d'Auvergne 
and Gooley, 2003</a>)
+     <li>Model selection (<a href="refs.html#dAuvergneGooley03">d'Auvergne 
and Gooley, 2003</a>; <a href="refs.html#Chen04">Chen et al., 2004</a>)
       <ul>
        <li>Akaike's Information Criteria (AIC)</li>
        <li>Small sample size corrected AIC (AICc)</li>

Modified: website/refs.html
URL: 
http://svn.gna.org/viewcvs/relax/website/refs.html?rev=5133&r1=5132&r2=5133&view=diff
==============================================================================
--- website/refs.html (original)
+++ website/refs.html Fri Mar 21 20:17:06 2008
@@ -64,12 +64,13 @@
  <div class="main_box">
   <h1>References</h1>
    <ul class="ref_ul">
+    <li class="ref_li" id="Chen04"> Chen, J., Brooks, 3rd, C. L., and 
Wright, P. E. (2004).  Model-free analysis of protein dynamics: assessment of 
accuracy and model selection protocols based on molecular dynamics 
simulation. <em>J. Biomol. NMR</em>, <strong>29</strong>(3), 243-257.</li>
+
     <li class="ref_li" id="Clore90">Clore, G. M., Szabo, A., Bax, A., Kay, 
L. E., Driscoll, P. C., and Gronenborn, A. M. (1990b).  Deviations from the 
simple 2-parameter model-free approach to the interpretation of N-15 nuclear 
magnetic-relaxation of proteins. <em>J. Am. Chem. Soc.</em>, 
<strong>112</strong>(12), 4989–4991.</li>
 
     <li class="ref_li" id="dAuvergne06">d'Auvergne, E. J. (2006).   Protein 
dynamics: a study of the model-free analysis of NMR relaxation data. (<a 
href="http://eprints.infodiv.unimelb.edu.au/archive/00002799/";>abstract</a>, 
<a 
href="http://eprints.infodiv.unimelb.edu.au/archive/00002799/01/thesis.pdf";>PDF</a>)</li>
 
-    <li class="ref_li" id="dAuvergneGooley03">d'Auvergne, E. J. and Gooley, 
P. R. (2003).  The use of model selection in the
-model-free analysis of protein dynamics. <em>J. Biomol. NMR</em>, 
<strong>25</strong>(1), 25–39. (<a 
href="http://dx.doi.org/10.1023/A:1021902006114";>abstract</a>)</li>
+    <li class="ref_li" id="dAuvergneGooley03">d'Auvergne, E. J. and Gooley, 
P. R. (2003).  The use of model selection in the model-free analysis of 
protein dynamics. <em>J. Biomol. NMR</em>, <strong>25</strong>(1), 25–39. 
(<a href="http://dx.doi.org/10.1023/A:1021902006114";>abstract</a>)</li>
 
     <li class="ref_li" id="dAuvergneGooley06">d'Auvergne, E. J. and Gooley, 
P. R. (2006).  Model-free model elimination:  A new step in the model-free 
dynamic analysis of NMR relaxation data. <em>J. Biomol. NMR</em>, 
<strong>35</strong>(2), 117–135. (<a 
href="http://dx.doi.org/10.1007/s10858-006-9007-z";>abstract</a>)</li>