mailr5779 - /1.3/specific_fns/model_free/model_free.py


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Posted by edward on April 16, 2008 - 17:09:
Author: bugman
Date: Wed Apr 16 17:09:57 2008
New Revision: 5779

URL: http://svn.gna.org/viewcvs/relax?rev=5779&view=rev
Log:
Converted the model-free map_bounds() method to the new relax design.


Modified:
    1.3/specific_fns/model_free/model_free.py

Modified: 1.3/specific_fns/model_free/model_free.py
URL: 
http://svn.gna.org/viewcvs/relax/1.3/specific_fns/model_free/model_free.py?rev=5779&r1=5778&r2=5779&view=diff
==============================================================================
--- 1.3/specific_fns/model_free/model_free.py (original)
+++ 1.3/specific_fns/model_free/model_free.py Wed Apr 16 17:09:57 2008
@@ -33,7 +33,7 @@
 from data import Data as relax_data_store
 from float import isNaN,isInf
 from generic_fns import diffusion_tensor
-from generic_fns.selection import count_spins, exists_mol_res_spin_data, 
return_spin_from_index, spin_loop
+from generic_fns.selection import count_spins, exists_mol_res_spin_data, 
return_spin, return_spin_from_index, spin_loop
 from maths_fns.mf import Mf
 from minimise.generic import generic_minimise
 from physical_constants import N15_CSA, NH_BOND_LENGTH
@@ -1487,23 +1487,29 @@
         return A, b
 
 
-    def map_bounds(self, run, param):
-        """The function for creating bounds for the mapping function."""
-
-        # Arguments.
-        self.run = run
+    def map_bounds(self, param, spin_id):
+        """Create bounds for the OpenDX mapping function.
+
+        @param param:   The name of the parameter to return the lower and 
upper bounds of.
+        @type param:    str
+        @return:        The upper and lower bounds of the parameter.
+        @rtype:         list of float
+        """
+
+        # Get the spin.
+        spin = return_spin(spin_id)
 
         # {S2, S2f, S2s}.
         if search('^s2', param):
-            return [0, 1]
+            return [0.0, 1.0]
 
         # {local tm, te, tf, ts}.
         elif search('^t', param) or param == 'local_tm':
-            return [0, 1e-8]
+            return [0.0, 1e-8]
 
         # Rex.
         elif param == 'rex':
-            return [0, 30.0 / (2.0 * pi * 
relax_data_store.frq[self.run][0])**2]
+            return [0.0, 30.0 / (2.0 * pi * spin.frq[0])**2]
 
         # Bond length.
         elif param == 'r':




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