Author: bugman Date: Sun May 4 11:58:40 2008 New Revision: 6069 URL: http://svn.gna.org/viewcvs/relax?rev=6069&view=rev Log: Merged revisions 6013-6068 via svnmerge from svn+ssh://bugman@xxxxxxxxxxx/svn/relax/1.3 ........ r6015 | bugman | 2008-05-01 11:56:06 +0200 (Thu, 01 May 2008) | 3 lines Spelling fixes: Renamed all references to 'unselect' to 'deselect' in the manual. ........ r6016 | bugman | 2008-05-01 12:03:26 +0200 (Thu, 01 May 2008) | 3 lines One last renaming of 'Unselect' to 'Deselect'. ........ r6018 | bugman | 2008-05-01 12:22:02 +0200 (Thu, 01 May 2008) | 3 lines Added a section for PyMOL in the installation chapter. ........ r6020 | bugman | 2008-05-01 12:52:26 +0200 (Thu, 01 May 2008) | 3 lines Shifted the installation chapter from chapter 1 to chapter 2. ........ r6021 | bugman | 2008-05-01 12:57:34 +0200 (Thu, 01 May 2008) | 3 lines Converted the 'How to use relax' part from a chapter to a section. ........ r6022 | bugman | 2008-05-01 13:00:12 +0200 (Thu, 01 May 2008) | 3 lines Fixed the R1 and R2 in the abbreviation section. ........ r6023 | bugman | 2008-05-01 14:11:53 +0200 (Thu, 01 May 2008) | 11 lines Improvements and expansion of the introduction chapter. These changes are in response to the email by Johnny Croy at https://mail.gna.org/public/relax-users/2008-04/msg00028.html (Message-id: <4E4F6DB4-5F27-4447-9EC9-6D2E9973A539@xxxxxxxxx>). The thread continues at https://mail.gna.org/public/relax-users/2008-05/msg00000.html (Message-id: <50dac1510bcb.510bcb50dac1@xxxxxxxxx>). Most of this text comes from the relax website (http://nmr-relax.com). ........ r6025 | bugman | 2008-05-01 14:17:27 +0200 (Thu, 01 May 2008) | 3 lines Shortened the short title of the 'Model-free analysis using the diffusion seeded paradigm' figure. ........ r6026 | bugman | 2008-05-01 15:01:47 +0200 (Thu, 01 May 2008) | 3 lines Updated the intro chapter to the new design. ........ r6027 | bugman | 2008-05-01 15:16:09 +0200 (Thu, 01 May 2008) | 3 lines Updated the NOE chapter of the relax manual to the new design. ........ r6028 | bugman | 2008-05-01 15:17:52 +0200 (Thu, 01 May 2008) | 3 lines Small fix for the NOE chapter. 'pipe.create' should have been written rather than 'run.create'. ........ r6029 | bugman | 2008-05-01 15:30:47 +0200 (Thu, 01 May 2008) | 3 lines More updates to the noe.py sample script for the new relax design. ........ r6030 | bugman | 2008-05-01 15:31:14 +0200 (Thu, 01 May 2008) | 3 lines More updates for the relax_fit.py sample script for the new relax design. ........ r6031 | bugman | 2008-05-01 15:42:07 +0200 (Thu, 01 May 2008) | 3 lines Updated the relaxation curve fitting chapter to the new relax design. ........ r6032 | bugman | 2008-05-01 16:35:25 +0200 (Thu, 01 May 2008) | 3 lines Completed the relaxation curve fitting chapter of the relax manual. ........ r6033 | bugman | 2008-05-01 16:39:50 +0200 (Thu, 01 May 2008) | 6 lines Added a copyright statement to the model-free.py sample script. The purpose of this is so the user knows who the author of the script was and how ancient the script is, as well as allowing the file to be redistributable. ........ r6036 | bugman | 2008-05-01 16:43:01 +0200 (Thu, 01 May 2008) | 3 lines Updated the model-free.py script to the new relax design. ........ r6037 | bugman | 2008-05-01 16:45:25 +0200 (Thu, 01 May 2008) | 3 lines The proton and heteronucleus types need to be set. ........ r6038 | bugman | 2008-05-01 16:47:22 +0200 (Thu, 01 May 2008) | 3 lines Removed the reference to 'run'. ........ r6039 | bugman | 2008-05-01 16:47:54 +0200 (Thu, 01 May 2008) | 3 lines Removed the call to the now non-existent 'nuclei()' user function. ........ r6040 | bugman | 2008-05-01 16:49:23 +0200 (Thu, 01 May 2008) | 3 lines Converted the model-free.py sample script presented in the model-free chapter to the new design. ........ r6041 | bugman | 2008-05-01 16:51:48 +0200 (Thu, 01 May 2008) | 6 lines Added a copyright statement to the mf_multimodel.py sample script. The purpose of this is so the user knows who the author of the script was and how ancient the script is, as well as allowing the file to be redistributable. ........ r6043 | bugman | 2008-05-01 16:54:31 +0200 (Thu, 01 May 2008) | 3 lines Updated the mf_multimodel.py sample script to the new relax design. ........ r6044 | bugman | 2008-05-01 17:02:41 +0200 (Thu, 01 May 2008) | 6 lines Added a copyright statement to the modsel.py sample script. The purpose of this is so the user knows who the author of the script was and how ancient the script is, as well as allowing the file to be redistributable. ........ r6046 | bugman | 2008-05-01 17:05:05 +0200 (Thu, 01 May 2008) | 3 lines Updated the modsel.py script to the new relax design. ........ r6047 | bugman | 2008-05-01 17:06:58 +0200 (Thu, 01 May 2008) | 3 lines Updated the rest of the model-free chapter of the relax manual to the new design. ........ r6048 | bugman | 2008-05-01 17:08:46 +0200 (Thu, 01 May 2008) | 3 lines Added the GPL to the index. ........ r6049 | bugman | 2008-05-01 17:11:06 +0200 (Thu, 01 May 2008) | 3 lines Changed all index entries of 'computer programs' to 'software'. ........ r6050 | bugman | 2008-05-01 17:16:03 +0200 (Thu, 01 May 2008) | 3 lines Removed a LaTeX file which was split into separate chapters long ago. ........ r6051 | bugman | 2008-05-01 17:23:59 +0200 (Thu, 01 May 2008) | 3 lines Updated the development chapter to the new relax design. ........ r6052 | bugman | 2008-05-01 17:32:50 +0200 (Thu, 01 May 2008) | 3 lines A few more updates to the development chapter for the new design. ........ r6053 | bugman | 2008-05-01 17:34:57 +0200 (Thu, 01 May 2008) | 3 lines Indexing fixes. ........ r6054 | bugman | 2008-05-01 17:37:39 +0200 (Thu, 01 May 2008) | 3 lines Fixed the indexing in the fetch_docstrings.py script. ........ r6055 | bugman | 2008-05-01 17:40:31 +0200 (Thu, 01 May 2008) | 3 lines Added automatic indexing for the model selection techniques. ........ Removed: branches/mol_res_spin_module_rename/docs/latex/data_analysis.tex Modified: branches/mol_res_spin_module_rename/ (props changed) branches/mol_res_spin_module_rename/docs/latex/bibliography.bib branches/mol_res_spin_module_rename/docs/latex/curvefit.tex branches/mol_res_spin_module_rename/docs/latex/develop.tex branches/mol_res_spin_module_rename/docs/latex/fetch_docstrings.py branches/mol_res_spin_module_rename/docs/latex/install.tex branches/mol_res_spin_module_rename/docs/latex/intro.tex branches/mol_res_spin_module_rename/docs/latex/licence.tex branches/mol_res_spin_module_rename/docs/latex/model-free.tex branches/mol_res_spin_module_rename/docs/latex/noe.tex branches/mol_res_spin_module_rename/docs/latex/relax.tex branches/mol_res_spin_module_rename/sample_scripts/mf_multimodel.py branches/mol_res_spin_module_rename/sample_scripts/model-free.py branches/mol_res_spin_module_rename/sample_scripts/modsel.py branches/mol_res_spin_module_rename/sample_scripts/noe.py branches/mol_res_spin_module_rename/sample_scripts/relax_fit.py [This mail would be too long, it was shortened to contain the URLs only.] Modified: branches/mol_res_spin_module_rename/docs/latex/bibliography.bib URL: http://svn.gna.org/viewcvs/relax/branches/mol_res_spin_module_rename/docs/latex/bibliography.bib?rev=6069&r1=6068&r2=6069&view=diff Modified: branches/mol_res_spin_module_rename/docs/latex/curvefit.tex URL: http://svn.gna.org/viewcvs/relax/branches/mol_res_spin_module_rename/docs/latex/curvefit.tex?rev=6069&r1=6068&r2=6069&view=diff Removed: branches/mol_res_spin_module_rename/docs/latex/data_analysis.tex URL: http://svn.gna.org/viewcvs/relax/branches/mol_res_spin_module_rename/docs/latex/data_analysis.tex?rev=6068&view=auto Modified: branches/mol_res_spin_module_rename/docs/latex/develop.tex URL: http://svn.gna.org/viewcvs/relax/branches/mol_res_spin_module_rename/docs/latex/develop.tex?rev=6069&r1=6068&r2=6069&view=diff Modified: branches/mol_res_spin_module_rename/docs/latex/fetch_docstrings.py URL: http://svn.gna.org/viewcvs/relax/branches/mol_res_spin_module_rename/docs/latex/fetch_docstrings.py?rev=6069&r1=6068&r2=6069&view=diff Modified: branches/mol_res_spin_module_rename/docs/latex/install.tex URL: http://svn.gna.org/viewcvs/relax/branches/mol_res_spin_module_rename/docs/latex/install.tex?rev=6069&r1=6068&r2=6069&view=diff Modified: branches/mol_res_spin_module_rename/docs/latex/intro.tex URL: http://svn.gna.org/viewcvs/relax/branches/mol_res_spin_module_rename/docs/latex/intro.tex?rev=6069&r1=6068&r2=6069&view=diff Modified: branches/mol_res_spin_module_rename/docs/latex/licence.tex URL: http://svn.gna.org/viewcvs/relax/branches/mol_res_spin_module_rename/docs/latex/licence.tex?rev=6069&r1=6068&r2=6069&view=diff Modified: branches/mol_res_spin_module_rename/docs/latex/model-free.tex URL: http://svn.gna.org/viewcvs/relax/branches/mol_res_spin_module_rename/docs/latex/model-free.tex?rev=6069&r1=6068&r2=6069&view=diff Modified: branches/mol_res_spin_module_rename/docs/latex/noe.tex URL: http://svn.gna.org/viewcvs/relax/branches/mol_res_spin_module_rename/docs/latex/noe.tex?rev=6069&r1=6068&r2=6069&view=diff Modified: branches/mol_res_spin_module_rename/docs/latex/relax.tex URL: http://svn.gna.org/viewcvs/relax/branches/mol_res_spin_module_rename/docs/latex/relax.tex?rev=6069&r1=6068&r2=6069&view=diff Modified: branches/mol_res_spin_module_rename/sample_scripts/mf_multimodel.py URL: http://svn.gna.org/viewcvs/relax/branches/mol_res_spin_module_rename/sample_scripts/mf_multimodel.py?rev=6069&r1=6068&r2=6069&view=diff Modified: branches/mol_res_spin_module_rename/sample_scripts/model-free.py URL: http://svn.gna.org/viewcvs/relax/branches/mol_res_spin_module_rename/sample_scripts/model-free.py?rev=6069&r1=6068&r2=6069&view=diff Modified: branches/mol_res_spin_module_rename/sample_scripts/modsel.py URL: http://svn.gna.org/viewcvs/relax/branches/mol_res_spin_module_rename/sample_scripts/modsel.py?rev=6069&r1=6068&r2=6069&view=diff Modified: branches/mol_res_spin_module_rename/sample_scripts/noe.py URL: http://svn.gna.org/viewcvs/relax/branches/mol_res_spin_module_rename/sample_scripts/noe.py?rev=6069&r1=6068&r2=6069&view=diff Modified: branches/mol_res_spin_module_rename/sample_scripts/relax_fit.py URL: http://svn.gna.org/viewcvs/relax/branches/mol_res_spin_module_rename/sample_scripts/relax_fit.py?rev=6069&r1=6068&r2=6069&view=diff