mailr6149 - /1.3/test_suite/unit_tests/_generic_fns/_structure/test_scientific.py


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Posted by edward on May 20, 2008 - 11:22:
Author: bugman
Date: Tue May 20 11:22:54 2008
New Revision: 6149

URL: http://svn.gna.org/viewcvs/relax?rev=6149&view=rev
Log:
Updated the Scientific python PDB structural object unit tests to call 
load_pdb().


Modified:
    1.3/test_suite/unit_tests/_generic_fns/_structure/test_scientific.py

Modified: 1.3/test_suite/unit_tests/_generic_fns/_structure/test_scientific.py
URL: 
http://svn.gna.org/viewcvs/relax/1.3/test_suite/unit_tests/_generic_fns/_structure/test_scientific.py?rev=6149&r1=6148&r2=6149&view=diff
==============================================================================
--- 1.3/test_suite/unit_tests/_generic_fns/_structure/test_scientific.py 
(original)
+++ 1.3/test_suite/unit_tests/_generic_fns/_structure/test_scientific.py Tue 
May 20 11:22:54 2008
@@ -63,7 +63,7 @@
         """Test the private Scientific_data.__molecule_loop() method."""
 
         # Load the PDB file.
-        self.data.load_structures(self.test_pdb_path)
+        self.data.load_pdb(self.test_pdb_path)
 
         # Loop over the molecules.
         mol_count = 0
@@ -84,7 +84,7 @@
         """Test the private Scientific_data.__molecule_loop() method with a 
selection object."""
 
         # Load the PDB file.
-        self.data.load_structures(self.test_pdb_path)
+        self.data.load_pdb(self.test_pdb_path)
 
         # Create the selection object (which should match the molecule name 
of None).
         sel_obj = Selection('@1')
@@ -108,7 +108,7 @@
         """Test the Scientific_data.__molecule_loop() method with a 
non-matching selection object."""
 
         # Load the PDB file.
-        self.data.load_structures(self.test_pdb_path)
+        self.data.load_pdb(self.test_pdb_path)
 
         # Create the non-matching selection object.
         sel_obj = Selection('#XXX')
@@ -126,7 +126,7 @@
         """Test the private Scientific_data.__residue_loop() method."""
 
         # Load the PDB file.
-        self.data.load_structures(self.test_pdb_path)
+        self.data.load_pdb(self.test_pdb_path)
 
         # Loop over the residues.
         res_count = 0
@@ -147,7 +147,7 @@
         """Test the private Scientific_data.__residue_loop() method with a 
selection object."""
 
         # Load the PDB file.
-        self.data.load_structures(self.test_pdb_path)
+        self.data.load_pdb(self.test_pdb_path)
 
         # Create the selection object (which should match the residue name 
of None).
         sel_obj = Selection('#Ap4Aase')
@@ -171,7 +171,7 @@
         """Test the Scientific_data.__residue_loop() method with a 
non-matching selection object."""
 
         # Load the PDB file.
-        self.data.load_structures(self.test_pdb_path)
+        self.data.load_pdb(self.test_pdb_path)
 
         # Create the non-matching selection object.
         sel_obj = Selection(':XXX')
@@ -189,7 +189,7 @@
         """Test the Scientific_data.atom_loop() method."""
 
         # Load the PDB file.
-        self.data.load_structures(self.test_pdb_path)
+        self.data.load_pdb(self.test_pdb_path)
 
         # Loop over the atoms.
         atom_count = 0
@@ -204,7 +204,7 @@
         """Test the Scientific_data.atom_loop() method with the '#XXX' mol 
selection."""
 
         # Load the PDB file.
-        self.data.load_structures(self.test_pdb_path)
+        self.data.load_pdb(self.test_pdb_path)
 
         # Loop over the atoms.
         atom_count = 0
@@ -219,7 +219,7 @@
         """Test the Scientific_data.atom_loop() method with the ':8' res 
selection."""
 
         # Load the PDB file.
-        self.data.load_structures(self.test_pdb_path)
+        self.data.load_pdb(self.test_pdb_path)
 
         # Loop over the atoms.
         atom_count = 0
@@ -239,7 +239,7 @@
         """Test the Scientific_data.atom_loop() method with the ':PRO' res 
selection."""
 
         # Load the PDB file.
-        self.data.load_structures(self.test_pdb_path)
+        self.data.load_pdb(self.test_pdb_path)
 
         # Loop over the atoms.
         atom_count = 0
@@ -258,7 +258,7 @@
         """Test the Scientific_data.atom_loop() method with the '@CA' spin 
selection."""
 
         # Load the PDB file.
-        self.data.load_structures(self.test_pdb_path)
+        self.data.load_pdb(self.test_pdb_path)
 
         # Loop over the atoms.
         atom_count = 0
@@ -277,7 +277,7 @@
         """Test the Scientific_data.atom_loop() method with the '@163' spin 
selection."""
 
         # Load the PDB file.
-        self.data.load_structures(self.test_pdb_path)
+        self.data.load_pdb(self.test_pdb_path)
 
         # Loop over the atoms.
         atom_count = 0
@@ -299,11 +299,11 @@
         self.assertEqual(atom_count, 1)
 
 
-    def test_load_structures(self):
-        """Load a PDB file using Scientific_data.load_structures()."""
-
-        # Load the PDB file.
-        self.data.load_structures(self.test_pdb_path)
+    def test_load_pdb(self):
+        """Load a PDB file using Scientific_data.load_pdb()."""
+
+        # Load the PDB file.
+        self.data.load_pdb(self.test_pdb_path)
 
         # Test the structural data.
         self.assertEqual(self.data.file_name, self.test_pdb_path)




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