r6996 - /1.3/sample_scripts/palmer.py -- July 28, 2008 - 21:49

Author: semor
Date: Mon Jul 28 21:49:33 2008
New Revision: 6996

URL: http://svn.gna.org/viewcvs/relax?rev=6996&view=rev
Log:
Removal of the run arguments.


Modified:
    1.3/sample_scripts/palmer.py

Modified: 1.3/sample_scripts/palmer.py
URL: 
http://svn.gna.org/viewcvs/relax/1.3/sample_scripts/palmer.py?rev=6996&r1=6995&r2=6996&view=diff
==============================================================================
--- 1.3/sample_scripts/palmer.py (original)
+++ 1.3/sample_scripts/palmer.py Mon Jul 28 21:49:33 2008
@@ -46,13 +46,13 @@
         value.set(name, -172 * 1e-6, 'csa')
 
         # Select the model-free model.
-        model_free.select_model(run=name, model=name)
+        model_free.select_model(model=name)
 
         # Create the Modelfree4 files.
-        palmer.create(run=name, force=0, sims=0)
+        palmer.create(force=0, sims=0)
 
         # Run Modelfree4.
-        palmer.execute(run=name, force=1)
+        palmer.execute(force=1)
 
     # Save the program state.
     state.save('stage1.save', force=1)
@@ -72,7 +72,7 @@
 
     # Extract the Modelfree4 data from the 'mfout' files.
     for name in runs:
-        palmer.extract(run=name)
+        palmer.extract()
 
     # Print out.
     print "\n\nModel selection."
@@ -85,7 +85,7 @@
     model_selection(method='AIC', modsel_run=name)
 
     # Write the results.
-    results.write(run=name, file='results', force=1)
+    results.write(file='results', force=1)
 
     # Save the program state.
     state.save('stage2.save', force=1)
@@ -107,13 +107,13 @@
     fix(name, 'diff', 0)
 
     # Create the Modelfree4 files (change sims as needed, see below).
-    palmer.create(run=name, dir='final', force=1, sims=0)
+    palmer.create(dir='final', force=1, sims=0)
 
     # Run Modelfree4.
-    palmer.execute(run=name, dir='final', force=1)
+    palmer.execute(dir='final', force=1)
 
     # Extract the Modelfree4 data from the 'mfout' file.
-    palmer.extract(run=name, dir='final')
+    palmer.extract(dir='final')
 
     # Save the program state.
     state.save('stage3.save', force=1)