Author: bugman
Date: Tue Jul 29 18:55:12 2008
New Revision: 7020
URL: http://svn.gna.org/viewcvs/relax?rev=7020&view=rev
Log:
Merged revisions 6956,6993-7019 via svnmerge from
svn+ssh://bugman@xxxxxxxxxxx/svn/relax/1.3
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r6956 | bugman | 2008-07-24 15:20:08 +0200 (Thu, 24 Jul 2008) | 3 lines
Another spelling fix for 'indices'.
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r6993 | semor | 2008-07-28 21:36:19 +0200 (Mon, 28 Jul 2008) | 3 lines
Started to add system tests for model-free analysis using Modelfree4.
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r6994 | semor | 2008-07-28 21:39:38 +0200 (Mon, 28 Jul 2008) | 3 lines
Alphabetical ordering...
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r6995 | semor | 2008-07-28 21:44:17 +0200 (Mon, 28 Jul 2008) | 5 lines
Added the spin_id variable.
This missing variable was found using the palmer system tests script...
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r6996 | semor | 2008-07-28 21:49:33 +0200 (Mon, 28 Jul 2008) | 3 lines
Removal of the run arguments.
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r6997 | semor | 2008-07-28 21:50:33 +0200 (Mon, 28 Jul 2008) | 3 lines
Conversion of force flags to bools.
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r6998 | semor | 2008-07-28 21:51:01 +0200 (Mon, 28 Jul 2008) | 3 lines
Conversion of force flags to bools.
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r6999 | semor | 2008-07-28 21:51:22 +0200 (Mon, 28 Jul 2008) | 3 lines
Conversion of force flags to bools.
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r7000 | semor | 2008-07-28 21:51:39 +0200 (Mon, 28 Jul 2008) | 3 lines
Conversion of force flags to bools.
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r7001 | semor | 2008-07-28 21:51:56 +0200 (Mon, 28 Jul 2008) | 3 lines
Conversion of force flags to bools.
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r7002 | semor | 2008-07-28 21:52:15 +0200 (Mon, 28 Jul 2008) | 3 lines
Conversion of force flags to bools.
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r7003 | semor | 2008-07-28 21:52:28 +0200 (Mon, 28 Jul 2008) | 3 lines
Conversion of force flags to bools.
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r7004 | semor | 2008-07-28 21:53:22 +0200 (Mon, 28 Jul 2008) | 3 lines
Conversion of force flags to bools.
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r7005 | semor | 2008-07-28 21:53:53 +0200 (Mon, 28 Jul 2008) | 3 lines
Conversion of force flags to bools.
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r7006 | semor | 2008-07-28 21:54:14 +0200 (Mon, 28 Jul 2008) | 3 lines
Conversion of force flags to bools.
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r7007 | semor | 2008-07-28 21:54:33 +0200 (Mon, 28 Jul 2008) | 3 lines
Conversion of force flags to bools.
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r7008 | semor | 2008-07-28 21:54:51 +0200 (Mon, 28 Jul 2008) | 3 lines
Conversion of force flags to bools.
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r7009 | semor | 2008-07-28 21:55:09 +0200 (Mon, 28 Jul 2008) | 3 lines
Conversion of force flags to bools.
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r7010 | semor | 2008-07-28 21:55:26 +0200 (Mon, 28 Jul 2008) | 3 lines
Conversion of force flags to bools.
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r7011 | semor | 2008-07-28 21:57:51 +0200 (Mon, 28 Jul 2008) | 3 lines
Removal of a few remaining run arguments.
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r7012 | semor | 2008-07-28 22:35:00 +0200 (Mon, 28 Jul 2008) | 5 lines
Added a check for the optionnal Modelfree4 program.
This check doesn't return a clean warning and should be improved.
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r7013 | semor | 2008-07-28 22:38:09 +0200 (Mon, 28 Jul 2008) | 3 lines
Corrected an error.
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r7014 | semor | 2008-07-28 22:44:16 +0200 (Mon, 28 Jul 2008) | 3 lines
Changed the setting of the heteronuclei to the new design.
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r7015 | semor | 2008-07-28 22:55:57 +0200 (Mon, 28 Jul 2008) | 3 lines
Corrected a typo.
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r7016 | semor | 2008-07-28 23:01:08 +0200 (Mon, 28 Jul 2008) | 3 lines
Corrected the same typo again.
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r7017 | bugman | 2008-07-29 14:32:06 +0200 (Tue, 29 Jul 2008) | 6 lines
The Modelfree4 system test is now skipped and passes if the binary
executable cannot be found.
This is in response to Seb's post at
https://mail.gna.org/public/relax-devel/2008-07/msg00035.html
(Message-id: <488E26B1.8010606@xxxxxxxxx>).
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r7018 | semor | 2008-07-29 16:11:31 +0200 (Tue, 29 Jul 2008) | 9 lines
Reverted revision 7012.
The command used was:
svn merge -r7012:7011 .
This follows a discussion started by Edward d'Auvergne at:
https://mail.gna.org/public/relax-devel/2008-07/msg00040.html (message ID:
7f080ed10807290154q5cd2ba33ga7135e3aad70b0ba@xxxxxxxxxxxxxx).
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r7019 | semor | 2008-07-29 16:20:01 +0200 (Tue, 29 Jul 2008) | 3 lines
Correcaedt the name of the function as the complete analysis is tested, not
only stage 1.
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Added:
branches/rdc_analysis/test_suite/system_tests/palmer.py
- copied unchanged from r7019, 1.3/test_suite/system_tests/palmer.py
branches/rdc_analysis/test_suite/system_tests/scripts/palmer.py
- copied unchanged from r7019,
1.3/test_suite/system_tests/scripts/palmer.py
Modified:
branches/rdc_analysis/ (props changed)
branches/rdc_analysis/docs/latex/maths.tex
branches/rdc_analysis/generic_fns/dasha.py
branches/rdc_analysis/generic_fns/grace.py
branches/rdc_analysis/generic_fns/pipes.py
branches/rdc_analysis/generic_fns/relax_data.py
branches/rdc_analysis/generic_fns/structure/geometric.py
branches/rdc_analysis/generic_fns/value.py
branches/rdc_analysis/prompt/molmol.py
branches/rdc_analysis/prompt/palmer.py
branches/rdc_analysis/relax_io.py
branches/rdc_analysis/sample_scripts/cv.py
branches/rdc_analysis/sample_scripts/dasha.py
branches/rdc_analysis/sample_scripts/diff_min.py
branches/rdc_analysis/sample_scripts/generate_ri.py
branches/rdc_analysis/sample_scripts/grace.py
branches/rdc_analysis/sample_scripts/jw_mapping.py
branches/rdc_analysis/sample_scripts/map.py
branches/rdc_analysis/sample_scripts/palmer.py
branches/rdc_analysis/sample_scripts/remap.py
branches/rdc_analysis/specific_fns/noe.py
branches/rdc_analysis/test_suite/system_tests/__init__.py
[This mail would be too long, it was shortened to contain the URLs only.]
Modified: branches/rdc_analysis/docs/latex/maths.tex
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/docs/latex/maths.tex?rev=7020&r1=7019&r2=7020&view=diff
Modified: branches/rdc_analysis/generic_fns/dasha.py
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/generic_fns/dasha.py?rev=7020&r1=7019&r2=7020&view=diff
Modified: branches/rdc_analysis/generic_fns/grace.py
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/generic_fns/grace.py?rev=7020&r1=7019&r2=7020&view=diff
Modified: branches/rdc_analysis/generic_fns/pipes.py
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/generic_fns/pipes.py?rev=7020&r1=7019&r2=7020&view=diff
Modified: branches/rdc_analysis/generic_fns/relax_data.py
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/generic_fns/relax_data.py?rev=7020&r1=7019&r2=7020&view=diff
Modified: branches/rdc_analysis/generic_fns/structure/geometric.py
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/generic_fns/structure/geometric.py?rev=7020&r1=7019&r2=7020&view=diff
Modified: branches/rdc_analysis/generic_fns/value.py
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/generic_fns/value.py?rev=7020&r1=7019&r2=7020&view=diff
Modified: branches/rdc_analysis/prompt/molmol.py
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/prompt/molmol.py?rev=7020&r1=7019&r2=7020&view=diff
Modified: branches/rdc_analysis/prompt/palmer.py
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/prompt/palmer.py?rev=7020&r1=7019&r2=7020&view=diff
Modified: branches/rdc_analysis/relax_io.py
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/relax_io.py?rev=7020&r1=7019&r2=7020&view=diff
Modified: branches/rdc_analysis/sample_scripts/cv.py
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/sample_scripts/cv.py?rev=7020&r1=7019&r2=7020&view=diff
Modified: branches/rdc_analysis/sample_scripts/dasha.py
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/sample_scripts/dasha.py?rev=7020&r1=7019&r2=7020&view=diff
Modified: branches/rdc_analysis/sample_scripts/diff_min.py
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/sample_scripts/diff_min.py?rev=7020&r1=7019&r2=7020&view=diff
Modified: branches/rdc_analysis/sample_scripts/generate_ri.py
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/sample_scripts/generate_ri.py?rev=7020&r1=7019&r2=7020&view=diff
Modified: branches/rdc_analysis/sample_scripts/grace.py
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/sample_scripts/grace.py?rev=7020&r1=7019&r2=7020&view=diff
Modified: branches/rdc_analysis/sample_scripts/jw_mapping.py
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/sample_scripts/jw_mapping.py?rev=7020&r1=7019&r2=7020&view=diff
Modified: branches/rdc_analysis/sample_scripts/map.py
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/sample_scripts/map.py?rev=7020&r1=7019&r2=7020&view=diff
Modified: branches/rdc_analysis/sample_scripts/palmer.py
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/sample_scripts/palmer.py?rev=7020&r1=7019&r2=7020&view=diff
Modified: branches/rdc_analysis/sample_scripts/remap.py
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/sample_scripts/remap.py?rev=7020&r1=7019&r2=7020&view=diff
Modified: branches/rdc_analysis/specific_fns/noe.py
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/specific_fns/noe.py?rev=7020&r1=7019&r2=7020&view=diff
Modified: branches/rdc_analysis/test_suite/system_tests/__init__.py
URL:
http://svn.gna.org/viewcvs/relax/branches/rdc_analysis/test_suite/system_tests/__init__.py?rev=7020&r1=7019&r2=7020&view=diff
r7020 - in /branches/rdc_analysis: ./ docs/latex/ generic_fns/ generic_fns/structure/ prompt/ sample_scripts/ specific_fns/ ...