r7221 - /1.3/generic_fns/structure/geometric.py -- August 21, 2008 - 18:01

Author: bugman
Date: Thu Aug 21 18:01:36 2008
New Revision: 7221

URL: http://svn.gna.org/viewcvs/relax?rev=7221&view=rev
Log:
Fixed calls to the atom_connect() structural API method.


Modified:
    1.3/generic_fns/structure/geometric.py

Modified: 1.3/generic_fns/structure/geometric.py
URL: 
http://svn.gna.org/viewcvs/relax/1.3/generic_fns/structure/geometric.py?rev=7221&r1=7220&r2=7221&view=diff
==============================================================================
--- 1.3/generic_fns/structure/geometric.py (original)
+++ 1.3/generic_fns/structure/geometric.py Thu Aug 21 18:01:36 2008
@@ -546,15 +546,15 @@
 
             # Connect to the previous atom (to generate the longitudinal 
lines).
             if j > j_min:
-                structure.atom_connect(index1=atom_num, index2=atom_num-1)
+                structure.atom_connect(index1=atom_num-1, index2=atom_num-2)
 
             # Connect across the radial arrays (to generate the latitudinal 
lines).
             if i != 0:
-                structure.atom_connect(index1=atom_num, 
index2=atom_num-j_min)
+                structure.atom_connect(index1=atom_num-1, 
index2=atom_num-1-j_min)
 
             # Connect the last radial array to the first (to zip up the 
geometric object and close the latitudinal lines).
             if i == inc-1:
-                structure.atom_connect(index1=atom_num, index2=origin_num+j)
+                structure.atom_connect(index1=atom_num-1, 
index2=origin_num-1+j)
 
             # Increment the atom number.
             atom_num = atom_num + 1