mailr7978 - /1.3/test_suite/system_tests/scripts/bug_12582.py


Others Months | Index by Date | Thread Index
>>   [Date Prev] [Date Next] [Thread Prev] [Thread Next]

Header


Content

Posted by edward on November 12, 2008 - 20:59:
Author: bugman
Date: Wed Nov 12 20:59:27 2008
New Revision: 7978

URL: http://svn.gna.org/viewcvs/relax?rev=7978&view=rev
Log:
Deleted the old system test script.


Removed:
    1.3/test_suite/system_tests/scripts/bug_12582.py

Removed: 1.3/test_suite/system_tests/scripts/bug_12582.py
URL: 
http://svn.gna.org/viewcvs/relax/1.3/test_suite/system_tests/scripts/bug_12582.py?rev=7977&view=auto
==============================================================================
--- 1.3/test_suite/system_tests/scripts/bug_12582.py (original)
+++ 1.3/test_suite/system_tests/scripts/bug_12582.py (removed)
@@ -1,39 +1,0 @@
-"""This system test catches 2 bugs submitted by Chris Brosey.
-
-The bugs include:
-    - Bug #12582 (https://gna.org/bugs/index.php?12582).
-    - Bug #12591 (https://gna.org/bugs/index.php?12591).
-"""
-
-# Python module imports.
-import sys
-
-
-# Path of the files.
-path = sys.path[-1] + 
'/test_suite/shared_data/model_free/S2_0.970_te_2048_Rex_0.149'
-
-# Loop over the models.
-for name in ['tm0', 'tm1']:
-
-    # Setup.
-    pipe.create(pipe_name=name, pipe_type='mf')
-    sequence.read(file='noe.500.out', dir=path, mol_name_col=None, 
res_num_col=0, res_name_col=1, spin_num_col=None, spin_name_col=None, 
sep=None)
-    relax_data.read(ri_label='R1', frq_label='500', frq=500208000.0, 
file='r1.500.out', dir=path, mol_name_col=None, res_num_col=0, 
res_name_col=1, spin_num_col=None, spin_name_col=None, data_col=2, 
error_col=3, sep=None)
-    relax_data.read(ri_label='R2', frq_label='500', frq=500208000.0, 
file='r2.500.out', dir=path, mol_name_col=None, res_num_col=0, 
res_name_col=1, spin_num_col=None, spin_name_col=None, data_col=2, 
error_col=3, sep=None)
-    relax_data.read(ri_label='NOE', frq_label='500', frq=500208000.0, 
file='noe.500.out', dir=path, mol_name_col=None, res_num_col=0, 
res_name_col=1, spin_num_col=None, spin_name_col=None, data_col=2, 
error_col=3, sep=None)
-    value.set(val=1.0200000000000001e-10, param='bond_length', spin_id=None)
-    value.set(val=-0.00017199999999999998, param='csa', spin_id=None)
-    value.set(val='15N', param='heteronucleus', spin_id=None)
-    value.set(val='1H', param='proton', spin_id=None)
-    model_free.select_model(model=name, spin_id=None)
-
-    # Optimisation.
-    grid_search(lower=None, upper=None, inc=11, constraints=True, 
verbosity=1)
-    minimise('newton', func_tol=1e-25, max_iterations=10000000, 
constraints=True, scaling=True, verbosity=1)
-
-    # Results writing.
-    results.write(file='devnull', force=True, compress_type=1)
-
-# Model selection.
-eliminate(function=None, args=None)
-model_selection(method='AIC', modsel_pipe='aic', pipes=['tm0', 'tm1'])




Related Messages


Powered by MHonArc, Updated Wed Nov 12 21:20:02 2008