r7994 - /branches/spectral_errors/test_suite/system_tests/scripts/noe.py -- November 20, 2008 - 23:39

Author: bugman
Date: Thu Nov 20 23:39:41 2008
New Revision: 7994

URL: http://svn.gna.org/viewcvs/relax?rev=7994&view=rev
Log:
Modified the noe.py system test script to use the new 'spectrum' user 
functions.


Modified:
    branches/spectral_errors/test_suite/system_tests/scripts/noe.py

Modified: branches/spectral_errors/test_suite/system_tests/scripts/noe.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/spectral_errors/test_suite/system_tests/scripts/noe.py?rev=7994&r1=7993&r2=7994&view=diff
==============================================================================
--- branches/spectral_errors/test_suite/system_tests/scripts/noe.py (original)
+++ branches/spectral_errors/test_suite/system_tests/scripts/noe.py Thu Nov 
20 23:39:41 2008
@@ -11,16 +11,16 @@
 spin.name(name='N')
 
 # Load the reference spectrum and saturated spectrum peak intensities.
-noe.read(file='ref_ave.list', dir=sys.path[-1] + 
'/test_suite/shared_data/peak_lists', spectrum_type='ref')
-noe.read(file='sat_ave.list', dir=sys.path[-1] + 
'/test_suite/shared_data/peak_lists', spectrum_type='sat')
+spectrum.read_intensities(file='ref_ave.list', dir=sys.path[-1] + 
'/test_suite/shared_data/peak_lists', spectrum_id='ref')
+spectrum.read_intensities(file='sat_ave.list', dir=sys.path[-1] + 
'/test_suite/shared_data/peak_lists', spectrum_id='sat')
 
 # Set the errors.
-noe.error(error=3600, spectrum_type='ref')
-noe.error(error=3000, spectrum_type='sat')
+spectrum.baseplane_rmsd(error=3600, spectrum_id='ref')
+spectrum.baseplane_rmsd(error=3000, spectrum_id='sat')
 
 # Individual residue errors.
-noe.error(error=122000, spectrum_type='ref', spin_id=":5")
-noe.error(error=8500, spectrum_type='sat', spin_id=":5")
+spectrum.baseplane_rmsd(error=122000, spectrum_type='ref', spin_id=":5")
+spectrum.baseplane_rmsd(error=8500, spectrum_type='sat', spin_id=":5")
 
 # Deselect unresolved residues.
 deselect.read(file='unresolved', dir=sys.path[-1] + 
'/test_suite/shared_data/curve_fitting')