r8562 - /branches/multi_structure/test_suite/system_tests/diffusion_tensor.py -- January 21, 2009 - 18:20

Author: bugman
Date: Wed Jan 21 18:20:03 2009
New Revision: 8562

URL: http://svn.gna.org/viewcvs/relax?rev=8562&view=rev
Log:
Fix for calls to structure.read_pdb() in the setUp() method.


Modified:
    branches/multi_structure/test_suite/system_tests/diffusion_tensor.py

Modified: branches/multi_structure/test_suite/system_tests/diffusion_tensor.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/multi_structure/test_suite/system_tests/diffusion_tensor.py?rev=8562&r1=8561&r2=8562&view=diff
==============================================================================
--- branches/multi_structure/test_suite/system_tests/diffusion_tensor.py 
(original)
+++ branches/multi_structure/test_suite/system_tests/diffusion_tensor.py Wed 
Jan 21 18:20:03 2009
@@ -43,21 +43,21 @@
 
         # Sphere tensor initialization.
         self.relax.interpreter._Pipe.switch('sphere')
-        
self.relax.interpreter._Structure.read_pdb(file='Ap4Aase_res1-12.pdb', 
dir=sys.path[-1] + '/test_suite/shared_data/structures', model=1)
+        
self.relax.interpreter._Structure.read_pdb(file='Ap4Aase_res1-12.pdb', 
dir=sys.path[-1] + '/test_suite/shared_data/structures', read_model=1)
         self.relax.interpreter._Sequence.read(file='Ap4Aase.seq', 
dir=sys.path[-1] + '/test_suite/shared_data/')
         self.relax.interpreter._Diffusion_tensor.init(10e-9, fixed=True)
         self.tmpfile_sphere = mktemp()
 
         # Spheroid tensor initialization.
         self.relax.interpreter._Pipe.switch('spheroid')
-        
self.relax.interpreter._Structure.read_pdb(file='Ap4Aase_res1-12.pdb', 
dir=sys.path[-1] + '/test_suite/shared_data/structures', model=1)
+        
self.relax.interpreter._Structure.read_pdb(file='Ap4Aase_res1-12.pdb', 
dir=sys.path[-1] + '/test_suite/shared_data/structures', read_model=1)
         self.relax.interpreter._Sequence.read(file='Ap4Aase.seq', 
dir=sys.path[-1] + '/test_suite/shared_data/')
         self.relax.interpreter._Diffusion_tensor.init((2e-8, 1.3, 60-360, 
290), param_types=2, spheroid_type='prolate', fixed=True)
         self.tmpfile_spheroid = mktemp()
 
         # Ellipsoid tensor initialization.
         self.relax.interpreter._Pipe.switch('ellipsoid')
-        
self.relax.interpreter._Structure.read_pdb(file='Ap4Aase_res1-12.pdb', 
dir=sys.path[-1] + '/test_suite/shared_data/structures', model=1)
+        
self.relax.interpreter._Structure.read_pdb(file='Ap4Aase_res1-12.pdb', 
dir=sys.path[-1] + '/test_suite/shared_data/structures', read_model=1)
         self.relax.interpreter._Sequence.read(file='Ap4Aase.seq', 
dir=sys.path[-1] + '/test_suite/shared_data/')
         self.relax.interpreter._Diffusion_tensor.init((9e-8, 5e6, 0.3, 
60+360, 290, 100), fixed=False)
         self.tmpfile_ellipsoid = mktemp()