Author: bugman Date: Thu Feb 5 14:42:51 2009 New Revision: 8742 URL: http://svn.gna.org/viewcvs/relax?rev=8742&view=rev Log: Modified the base API bond_vectors() method. Modified: 1.3/generic_fns/structure/api_base.py Modified: 1.3/generic_fns/structure/api_base.py URL: http://svn.gna.org/viewcvs/relax/1.3/generic_fns/structure/api_base.py?rev=8742&r1=8741&r2=8742&view=diff ============================================================================== --- 1.3/generic_fns/structure/api_base.py (original) +++ 1.3/generic_fns/structure/api_base.py Thu Feb 5 14:42:51 2009 @@ -149,18 +149,25 @@ raise RelaxImplementError - def bond_vectors(self, atom_id=None, attached_atom=None, model_num=None, return_name=False, return_warnings=False): + def bond_vectors(self, attached_atom=None, model_num=None, mol_name=None, res_num=None, res_name=None, spin_num=None, spin_name=None, return_name=False, return_warnings=False): """Prototype method stub for finding the bond vectors between 'attached_atom' and 'atom_id'. - @keyword atom_id: The molecule, residue, and atom identifier string. This must - correspond to a single atom in the system. - @type atom_id: str @keyword attached_atom: The name of the bonded atom. @type attached_atom: str @keyword model_num: The model of which to return the vectors from. If not supplied and multiple models exist, then vectors from all models will be returned. @type model_num: None or int + @keyword mol_name: The name of the molecule that attached_atom belongs to. + @type mol_name: str + @keyword res_num: The number of the residue that attached_atom belongs to. + @type res_num: str + @keyword res_name: The name of the residue that attached_atom belongs to. + @type res_name: str + @keyword spin_num: The number of the spin that attached_atom is attached to. + @type spin_num: str + @keyword spin_name: The name of the spin that attached_atom is attached to. + @type spin_name: str @keyword return_name: A flag which if True will cause the name of the attached atom to be returned together with the bond vectors. @type return_name: bool