mailr9006 - /branches/ave_noe/test_suite/system_tests/noe_restraints.py


Others Months | Index by Date | Thread Index
>>   [Date Prev] [Date Next] [Thread Prev] [Thread Next]

Header


Content

Posted by edward on April 09, 2009 - 19:46:
Author: bugman
Date: Thu Apr  9 19:46:04 2009
New Revision: 9006

URL: http://svn.gna.org/viewcvs/relax?rev=9006&view=rev
Log:
Fix for the rna_seq() method.

The create_residue() and create_molecule() functions were being incorrectly 
called.


Modified:
    branches/ave_noe/test_suite/system_tests/noe_restraints.py

Modified: branches/ave_noe/test_suite/system_tests/noe_restraints.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/ave_noe/test_suite/system_tests/noe_restraints.py?rev=9006&r1=9005&r2=9006&view=diff
==============================================================================
--- branches/ave_noe/test_suite/system_tests/noe_restraints.py (original)
+++ branches/ave_noe/test_suite/system_tests/noe_restraints.py Thu Apr  9 
19:46:04 2009
@@ -71,21 +71,15 @@
             # Create the molecule.
             create_molecule(mol_names[i])
 
-            # The molecule id string.
-            mol_id = '#' + mol_names[i]
-
             # Loop over the residues.
             for j in range(len(res_nums[i])):
                 # Create the residue.
-                create_residue(res_nums[i][j], mol_id=mol_id)
-
-                # The residue id string.
-                res_id = mol_id + ':' + `res_nums[i][j]`
+                create_residue(res_nums[i][j], mol_name=mol_names[i])
 
                 # Loop over the atoms.
                 for k in range(len(spin_names[i][j])):
                     # Create the spin.
-                    create_spin(spin_names[i][j][k], res_id=res_id)
+                    create_spin(spin_names[i][j][k], res_num=res_nums[i][j], 
mol_name=mol_names[i])
 
         # Display the sequence for debugging.
         self.relax.interpreter._Sequence.display()




Related Messages


Powered by MHonArc, Updated Fri Apr 10 21:00:08 2009