Author: semor
Date: Tue Jun 2 20:01:04 2009
New Revision: 9067
URL: http://svn.gna.org/viewcvs/relax?rev=9067&view=rev
Log:
Merged revisions 9048-9066 via svnmerge from
svn+ssh://semor@xxxxxxxxxxx/svn/relax/1.3
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r9048 | bugman | 2009-05-12 04:47:02 -0400 (Tue, 12 May 2009) | 3 lines
Updated the pipes.hybridise() user function interface to the 1.3 line
design.
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r9049 | bugman | 2009-05-12 05:09:24 -0400 (Tue, 12 May 2009) | 3 lines
Added 3 new RelaxErrors for sequence matching.
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r9050 | bugman | 2009-05-12 05:21:59 -0400 (Tue, 12 May 2009) | 3 lines
Added the pipe keyword to all the sequence counting functions.
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r9051 | bugman | 2009-05-12 05:22:41 -0400 (Tue, 12 May 2009) | 3 lines
Renamed the hybridise() pipes keyword to pipe_list.
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r9052 | bugman | 2009-05-12 05:25:38 -0400 (Tue, 12 May 2009) | 3 lines
Created the compare_sequence() for checking if 2 sequences are the same.
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r9053 | bugman | 2009-05-12 05:28:49 -0400 (Tue, 12 May 2009) | 3 lines
Converted the hybridise() method to the 1.3 line design.
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r9054 | bugman | 2009-05-12 05:31:08 -0400 (Tue, 12 May 2009) | 3 lines
Added the hybrid data pipe to the list of allowable data pipes.
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r9055 | bugman | 2009-05-12 05:34:40 -0400 (Tue, 12 May 2009) | 3 lines
Added a check for the pipe type to hybridise().
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r9056 | bugman | 2009-05-12 05:41:12 -0400 (Tue, 12 May 2009) | 3 lines
Converted the duplicate_data() method to the 1.3 line design.
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r9057 | bugman | 2009-05-12 08:42:06 -0400 (Tue, 12 May 2009) | 3 lines
Removed a test that disallowed model selection between different pipe types.
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r9058 | bugman | 2009-05-12 08:56:23 -0400 (Tue, 12 May 2009) | 5 lines
Converted all parts of the hybrid module to the 1.3 line design.
This includes the addition of many new, very simple methods and the
translation of old code.
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r9059 | bugman | 2009-05-15 04:47:59 -0400 (Fri, 15 May 2009) | 3 lines
Created the R_axis_angle() function to generate the rotation matrix from
the axis-angle notation.
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r9060 | bugman | 2009-05-15 05:58:55 -0400 (Fri, 15 May 2009) | 3 lines
Added the functions random_rot_axis() and random_R() to generate random
rotations.
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r9061 | bugman | 2009-05-25 07:45:14 -0400 (Mon, 25 May 2009) | 6 lines
Changed the precision of the te check in the model-free system tests.
This is in response to Sebastian's post at
https://mail.gna.org/public/relax-devel/2009-05/msg00003.html.
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r9062 | bugman | 2009-05-28 09:37:08 -0400 (Thu, 28 May 2009) | 3 lines
Renamed random_R() to R_random_axis().
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r9063 | bugman | 2009-05-28 09:57:48 -0400 (Thu, 28 May 2009) | 3 lines
Wrote 2 new functions, R_random_hypersphere() and quaternion_to_R().
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r9064 | bugman | 2009-05-28 10:53:23 -0400 (Thu, 28 May 2009) | 3 lines
Bug fix for the quaternion_to_R() function.
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r9065 | bugman | 2009-05-29 04:47:09 -0400 (Fri, 29 May 2009) | 3 lines
Fix for the align_tensor.init() user function docstring.
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r9066 | bugman | 2009-06-02 07:54:11 -0400 (Tue, 02 Jun 2009) | 3 lines
Indentation fix.
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Modified:
branches/relax_disp/ (props changed)
branches/relax_disp/generic_fns/model_selection.py
branches/relax_disp/generic_fns/mol_res_spin.py
branches/relax_disp/generic_fns/pipes.py
branches/relax_disp/generic_fns/sequence.py
branches/relax_disp/maths_fns/rotation_matrix.py
branches/relax_disp/prompt/align_tensor.py
branches/relax_disp/prompt/pipe.py
branches/relax_disp/relax_errors.py
branches/relax_disp/specific_fns/hybrid.py
branches/relax_disp/test_suite/system_tests/model_free.py
[This mail would be too long, it was shortened to contain the URLs only.]
Modified: branches/relax_disp/generic_fns/model_selection.py
URL:
http://svn.gna.org/viewcvs/relax/branches/relax_disp/generic_fns/model_selection.py?rev=9067&r1=9066&r2=9067&view=diff
Modified: branches/relax_disp/generic_fns/mol_res_spin.py
URL:
http://svn.gna.org/viewcvs/relax/branches/relax_disp/generic_fns/mol_res_spin.py?rev=9067&r1=9066&r2=9067&view=diff
Modified: branches/relax_disp/generic_fns/pipes.py
URL:
http://svn.gna.org/viewcvs/relax/branches/relax_disp/generic_fns/pipes.py?rev=9067&r1=9066&r2=9067&view=diff
Modified: branches/relax_disp/generic_fns/sequence.py
URL:
http://svn.gna.org/viewcvs/relax/branches/relax_disp/generic_fns/sequence.py?rev=9067&r1=9066&r2=9067&view=diff
Modified: branches/relax_disp/maths_fns/rotation_matrix.py
URL:
http://svn.gna.org/viewcvs/relax/branches/relax_disp/maths_fns/rotation_matrix.py?rev=9067&r1=9066&r2=9067&view=diff
Modified: branches/relax_disp/prompt/align_tensor.py
URL:
http://svn.gna.org/viewcvs/relax/branches/relax_disp/prompt/align_tensor.py?rev=9067&r1=9066&r2=9067&view=diff
Modified: branches/relax_disp/prompt/pipe.py
URL:
http://svn.gna.org/viewcvs/relax/branches/relax_disp/prompt/pipe.py?rev=9067&r1=9066&r2=9067&view=diff
Modified: branches/relax_disp/relax_errors.py
URL:
http://svn.gna.org/viewcvs/relax/branches/relax_disp/relax_errors.py?rev=9067&r1=9066&r2=9067&view=diff
Modified: branches/relax_disp/specific_fns/hybrid.py
URL:
http://svn.gna.org/viewcvs/relax/branches/relax_disp/specific_fns/hybrid.py?rev=9067&r1=9066&r2=9067&view=diff
Modified: branches/relax_disp/test_suite/system_tests/model_free.py
URL:
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/system_tests/model_free.py?rev=9067&r1=9066&r2=9067&view=diff
r9067 - in /branches/relax_disp: ./ generic_fns/ maths_fns/ prompt/ specific_fns/ test_suite/system_tests/