Author: bugman
Date: Thu Jul 2 23:25:33 2009
New Revision: 9185
URL: http://svn.gna.org/viewcvs/relax?rev=9185&view=rev
Log:
Renamed n_state_model.set_domain() to align_tensor.set_domain().
Modified:
branches/frame_order/prompt/align_tensor.py
branches/frame_order/prompt/n_state_model.py
Modified: branches/frame_order/prompt/align_tensor.py
URL:
http://svn.gna.org/viewcvs/relax/branches/frame_order/prompt/align_tensor.py?rev=9185&r1=9184&r2=9185&view=diff
==============================================================================
--- branches/frame_order/prompt/align_tensor.py (original)
+++ branches/frame_order/prompt/align_tensor.py Thu Jul 2 23:25:33 2009
@@ -380,6 +380,51 @@
align_tensor.reduction(full_tensor=full_tensor,
red_tensor=red_tensor)
+ def set_domain(self, tensor=None, domain=None):
+ """Set the domain label for the alignment tensor.
+
+ Keyword Arguments
+ ~~~~~~~~~~~~~~~~~
+
+ tensor: The alignment tensor to assign the domain label to.
+
+ domain: The domain label.
+
+
+ Description
+ ~~~~~~~~~~~
+
+ Prior to optimisation of the N-state model or Frame Order theories,
the domain to which each
+ alignment tensor belongs must be specified.
+
+
+ Examples
+ ~~~~~~~~
+
+ To link the alignment tensor loaded as 'chi3 C-dom' to the
C-terminal domain 'C', type:
+
+ relax> align_tensor.set_domain(tensor='chi3 C-dom', domain='C')
+ """
+
+ # Function intro text.
+ if self.__relax__.interpreter.intro:
+ text = sys.ps3 + "align_tensor.set_domain("
+ text = text + "tensor=" + `tensor`
+ text = text + ", domain=" + `domain` + ")"
+ print text
+
+ # Tensor argument.
+ if type(tensor) != str:
+ raise RelaxStrError, ('tensor', tensor)
+
+ # Domain argument.
+ if type(domain) != str:
+ raise RelaxStrError, ('domain', domain)
+
+ # Execute the functional code.
+ align_tensor.set_domain(tensor=tensor, domain=domain)
+
+
def svd(self, basis_set=0, tensors=None):
"""Function for calculating the singular values for all tensors and
the condition number.
Modified: branches/frame_order/prompt/n_state_model.py
URL:
http://svn.gna.org/viewcvs/relax/branches/frame_order/prompt/n_state_model.py?rev=9185&r1=9184&r2=9185&view=diff
==============================================================================
--- branches/frame_order/prompt/n_state_model.py (original)
+++ branches/frame_order/prompt/n_state_model.py Thu Jul 2 23:25:33 2009
@@ -332,48 +332,3 @@
# Execute the functional code.
n_state_model_obj.select_model(model=model)
-
-
- def set_domain(self, tensor=None, domain=None):
- """Set the domain label for the alignment tensor.
-
- Keyword Arguments
- ~~~~~~~~~~~~~~~~~
-
- tensor: The alignment tensor to assign the domain label to.
-
- domain: The domain label.
-
-
- Description
- ~~~~~~~~~~~
-
- Prior to optimisation of the N-state model, the domain to which each
alignment tensor
- belongs must be specified.
-
-
- Examples
- ~~~~~~~~
-
- To link the alignment tensor loaded as 'chi3 C-dom' to the
C-terminal domain 'C', type:
-
- relax> n_state_model.set_domain(tensor='chi3 C-dom', domain='C')
- """
-
- # Function intro text.
- if self.__relax__.interpreter.intro:
- text = sys.ps3 + "n_state_model.set_domain("
- text = text + "tensor=" + `tensor`
- text = text + ", domain=" + `domain` + ")"
- print text
-
- # Tensor argument.
- if type(tensor) != str:
- raise RelaxStrError, ('tensor', tensor)
-
- # Domain argument.
- if type(domain) != str:
- raise RelaxStrError, ('domain', domain)
-
- # Execute the functional code.
- n_state_model_obj.set_domain(tensor=tensor, domain=domain)
r9185 - in /branches/frame_order/prompt: align_tensor.py n_state_model.py