mailr9619 - /1.3/test_suite/system_tests/peak_lists.py


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Posted by edward on October 07, 2009 - 10:29:
Author: bugman
Date: Wed Oct  7 10:29:47 2009
New Revision: 9619

URL: http://svn.gna.org/viewcvs/relax?rev=9619&view=rev
Log:
Deleted the test_read_peak_list_generic2() system test.

This was just duplicating test_read_peak_list_generic().


Modified:
    1.3/test_suite/system_tests/peak_lists.py

Modified: 1.3/test_suite/system_tests/peak_lists.py
URL: 
http://svn.gna.org/viewcvs/relax/1.3/test_suite/system_tests/peak_lists.py?rev=9619&r1=9618&r2=9619&view=diff
==============================================================================
--- 1.3/test_suite/system_tests/peak_lists.py (original)
+++ 1.3/test_suite/system_tests/peak_lists.py Wed Oct  7 10:29:47 2009
@@ -90,44 +90,6 @@
         for i in range(10):
             for j in range(5):
                 self.assertEqual(cdp.mol[0].res[0].spin[j].intensities[i], 
heights[j][i])
-
-
-    def test_read_peak_list_generic2(self):
-        """Test the reading of a generic peak intensity list (test number 
2)."""
-
-        # Create the sequence data, and name the spins.
-        self.relax.interpreter._Residue.create(20)
-        self.relax.interpreter._Residue.create(23)
-        self.relax.interpreter._Residue.create(34)
-        self.relax.interpreter._Residue.create(35)
-        self.relax.interpreter._Residue.create(36)
-        self.relax.interpreter._Spin.name(name='N')
-
-        # Spectrum ids.
-        spectrum_ids = ['0.0109016', '0.0218032', '0.0436064', '0.0436064', 
'0.0872128', '0.1744260', '0.3488510', '0.6977020', '1.3954000', '1.9949900']
-
-        # Read the peak list.
-        
self.relax.interpreter._Spectrum.read_intensities(file="generic_intensity2.txt",
 dir=sys.path[-1] + sep+'test_suite'+sep+'shared_data'+sep+'peak_lists', 
spectrum_id=spectrum_ids, int_col=range(2, 12), int_method='volume', 
mol_name_col=None, res_num_col=0, res_name_col=1, spin_num_col=None, 
spin_name_col=None)
-
-        # The intensities.
-        intensities = []
-        intensities.append([1.0000, 0.9714, 0.9602, 0.9626, 0.8839, 0.8327, 
0.7088, 0.5098, 0.2410, 0.1116])
-        intensities.append([1.0000, 0.9789, 0.9751, 0.9762, 0.9074, 0.8532, 
0.7089, 0.5170, 0.2444, 0.1537])
-        intensities.append([1.0000, 0.9659, 0.9580, 0.9559, 0.9325, 0.8460, 
0.7187, 0.5303, 0.2954, 0.1683])
-        intensities.append([1.0000, 0.9657, 0.9389, 0.9366, 0.9331, 0.8683, 
0.7169, 0.5357, 0.2769, 0.1625])
-        intensities.append([1.0000, 1.0060, 0.9556, 0.9456, 0.9077, 0.8411, 
0.6788, 0.4558, 0.2448, 0.1569])
-
-        # Test the spectrum ids.
-        self.assertEqual(cdp.spectrum_ids, spectrum_ids)
-
-        # Test the data.
-        index = 0
-        for spin in spin_loop():
-            for j in xrange(len(spin.intensities)):
-                self.assertEqual(spin.intensities[j], intensities[index][j])
-
-            # Increment the index.
-            index = index + 1
 
 
     def test_read_peak_list_nmrview(self):




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