mailr10965 - /1.3/generic_fns/relax_data.py


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Posted by edward on March 10, 2010 - 17:39:
Author: bugman
Date: Wed Mar 10 17:39:33 2010
New Revision: 10965

URL: http://svn.gna.org/viewcvs/relax?rev=10965&view=rev
Log:
Fixes for the back_calc() method.

The find_index() function was already defined (so renamed to 
find_ri_index()), and the analysis
specific API back_calc_ri() method was incorrectly called.


Modified:
    1.3/generic_fns/relax_data.py

Modified: 1.3/generic_fns/relax_data.py
URL: 
http://svn.gna.org/viewcvs/relax/1.3/generic_fns/relax_data.py?rev=10965&r1=10964&r2=10965&view=diff
==============================================================================
--- 1.3/generic_fns/relax_data.py (original)
+++ 1.3/generic_fns/relax_data.py Wed Mar 10 17:39:33 2010
@@ -1,6 +1,6 @@
 
###############################################################################
 #                                                                            
 #
-# Copyright (C) 2003-2009 Edward d'Auvergne                                  
 #
+# Copyright (C) 2003-2010 Edward d'Auvergne                                  
 #
 #                                                                            
 #
 # This file is part of the program relax.                                    
 #
 #                                                                            
 #
@@ -29,7 +29,7 @@
 
 # relax module imports.
 from data import Relax_data_store; ds = Relax_data_store()
-from generic_fns.mol_res_spin import create_spin, exists_mol_res_spin_data, 
generate_spin_id, return_spin, spin_index_loop, spin_loop
+from generic_fns.mol_res_spin import create_spin, exists_mol_res_spin_data, 
find_index, generate_spin_id, return_spin, spin_index_loop, spin_loop
 from generic_fns import pipes
 from generic_fns import value
 from relax_errors import RelaxError, RelaxNoRiError, RelaxNoSequenceError, 
RelaxNoSpinError, RelaxRiError
@@ -196,7 +196,7 @@
         update_data_structures_spin(spin, ri_label, frq_label, frq)
 
         # Back-calculate the relaxation value.
-        value = back_calculate(spin=spin_index, ri_label=ri_label, 
frq_label=frq_label, frq=frq)
+        value = back_calculate(spin_index=spin_index, ri_label=ri_label, 
frq_label=frq_label, frq=frq)
 
         # Update all data structures.
         update_data_structures_spin(spin, ri_label, frq_label, frq, value)
@@ -278,7 +278,7 @@
             spin_to = dp_to.mol[mol_index].res[res_index].spin[spin_index]
 
             # Find the index corresponding to 'ri_label' and 'frq_label'.
-            index = find_index(spin_from, ri_label, frq_label)
+            index = find_ri_index(spin_from, ri_label, frq_label)
 
             # Catch any problems.
             if index == None:
@@ -426,7 +426,7 @@
         global_flag = False
 
         # Find the index corresponding to 'ri_label' and 'frq_label'.
-        index = find_index(spin, ri_label, frq_label)
+        index = find_ri_index(spin, ri_label, frq_label)
 
         # Catch any problems.
         if index == None:
@@ -488,7 +488,7 @@
     value.write_data(param=(ri_label, frq_label), file=sys.stdout, 
return_value=return_value)
 
 
-def find_index(data, ri_label, frq_label):
+def find_ri_index(data, ri_label, frq_label):
     """Find the index corresponding to ri_label and frq_label.
 
     @param data:        The class instance containing the ri_label and 
frq_label variables.
@@ -700,7 +700,7 @@
     error = None
 
     # Find the index corresponding to 'ri_label' and 'frq_label'.
-    index = find_index(spin, ri_label, frq_label)
+    index = find_ri_index(spin, ri_label, frq_label)
 
     # Get the data.
     if index != None:
@@ -822,7 +822,7 @@
     data_init(spin, global_flag=False)
 
     # Find the index corresponding to 'ri_label' and 'frq_label'.
-    index = find_index(spin, ri_label, frq_label)
+    index = find_ri_index(spin, ri_label, frq_label)
 
     # Append empty data.
     if index == None:




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