mailr11150 - /1.3/prompt/structure.py


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Posted by edward on April 27, 2010 - 17:30:
Author: bugman
Date: Tue Apr 27 17:30:47 2010
New Revision: 11150

URL: http://svn.gna.org/viewcvs/relax?rev=11150&view=rev
Log:
Fixes for the structure.load_spins() user function docstring for RNA/DNA work.


Modified:
    1.3/prompt/structure.py

Modified: 1.3/prompt/structure.py
URL: 
http://svn.gna.org/viewcvs/relax/1.3/prompt/structure.py?rev=11150&r1=11149&r2=11150&view=diff
==============================================================================
--- 1.3/prompt/structure.py (original)
+++ 1.3/prompt/structure.py Tue Apr 27 17:30:47 2010
@@ -320,10 +320,20 @@
         N3, C5, and C6, type the following series of commands (assuming that 
the PDB file with this
         atom naming has already been read):
 
-        relax> structure.load_spins(spin_id=':A@C8&@C2')
-        relax> structure.load_spins(spin_id=':G@C8&@N1')
-        relax> structure.load_spins(spin_id=':C@C5&@C6')
-        relax> structure.load_spins(spin_id=':U@N3&@C5&@C6')
+        relax> structure.load_spins(spin_id=":A@C8")
+        relax> structure.load_spins(spin_id=":A@C2")
+        relax> structure.load_spins(spin_id=":G@C8")
+        relax> structure.load_spins(spin_id=":G@N1")
+        relax> structure.load_spins(spin_id=":C@C5")
+        relax> structure.load_spins(spin_id=":C@C6")
+        relax> structure.load_spins(spin_id=":U@N3")
+        relax> structure.load_spins(spin_id=":U@C5")
+        relax> structure.load_spins(spin_id=":U@C6")
+
+        Alternatively using some Python programming:
+
+        relax> for id in [":A@C8", ":A@C2", ":G@C8", ":G@N1", ":C@C5", 
":C@C6", ":U@N3", ":U@C5", ":U@C6"]:
+        relax>     structure.load_spins(spin_id=id)
         """
 
         # Function intro text.




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