r11278 - /1.3/test_suite/system_tests/scripts/n_state_model/ -- July 02, 2010 - 10:59

Author: bugman
Date: Fri Jul  2 10:59:20 2010
New Revision: 11278

URL: http://svn.gna.org/viewcvs/relax?rev=11278&view=rev
Log:
Fixes for the system tests for the pcs.centre() to paramag.centre() shift.


Modified:
    1.3/test_suite/system_tests/scripts/n_state_model/dna_pcs_fit.py
    1.3/test_suite/system_tests/scripts/n_state_model/lactose_n_state.py
    1.3/test_suite/system_tests/scripts/n_state_model/missing_data_test.py
    1.3/test_suite/system_tests/scripts/n_state_model/populations.py

Modified: 1.3/test_suite/system_tests/scripts/n_state_model/dna_pcs_fit.py
URL: 
http://svn.gna.org/viewcvs/relax/1.3/test_suite/system_tests/scripts/n_state_model/dna_pcs_fit.py?rev=11278&r1=11277&r2=11278&view=diff
==============================================================================
--- 1.3/test_suite/system_tests/scripts/n_state_model/dna_pcs_fit.py 
(original)
+++ 1.3/test_suite/system_tests/scripts/n_state_model/dna_pcs_fit.py Fri Jul  
2 10:59:20 2010
@@ -33,9 +33,9 @@
 
 # The paramagnetic centre location.
 if ds.para_centre == 'true':
-    pcs.centre(pos=[25.8279, -11.6382, -2.5931])
+    paramag.centre(pos=[25.8279, -11.6382, -2.5931])
 elif ds.para_centre == 'zero':
-    pcs.centre(pos=[0, 0, 0])
+    paramag.centre(pos=[0, 0, 0])
 
 # Set up the model.
 n_state_model.select_model(model='fixed')

Modified: 1.3/test_suite/system_tests/scripts/n_state_model/lactose_n_state.py
URL: 
http://svn.gna.org/viewcvs/relax/1.3/test_suite/system_tests/scripts/n_state_model/lactose_n_state.py?rev=11278&r1=11277&r2=11278&view=diff
==============================================================================
--- 1.3/test_suite/system_tests/scripts/n_state_model/lactose_n_state.py 
(original)
+++ 1.3/test_suite/system_tests/scripts/n_state_model/lactose_n_state.py Fri 
Jul  2 10:59:20 2010
@@ -80,7 +80,7 @@
 pipe.switch('lactose')
 
 # Calculate the paramagnetic centre (from the structures in the 'tag' data 
pipe).
-pcs.centre(atom_id=':4@C1', pipe='tag')
+paramag.centre(atom_id=':4@C1', pipe='tag')
 
 # Set up the model.
 n_state_model.select_model(model=ds.model)

Modified: 
1.3/test_suite/system_tests/scripts/n_state_model/missing_data_test.py
URL: 
http://svn.gna.org/viewcvs/relax/1.3/test_suite/system_tests/scripts/n_state_model/missing_data_test.py?rev=11278&r1=11277&r2=11278&view=diff
==============================================================================
--- 1.3/test_suite/system_tests/scripts/n_state_model/missing_data_test.py 
(original)
+++ 1.3/test_suite/system_tests/scripts/n_state_model/missing_data_test.py 
Fri Jul  2 10:59:20 2010
@@ -49,7 +49,7 @@
     frq.set(id=align_list[i], frq=799.75376122 * 1e6)
 
 # Set the paramagnetic centre.
-pcs.centre([1, 2, -30])
+paramag.centre([1, 2, -30])
 
 # Set up the model.
 n_state_model.select_model(model='fixed')

Modified: 1.3/test_suite/system_tests/scripts/n_state_model/populations.py
URL: 
http://svn.gna.org/viewcvs/relax/1.3/test_suite/system_tests/scripts/n_state_model/populations.py?rev=11278&r1=11277&r2=11278&view=diff
==============================================================================
--- 1.3/test_suite/system_tests/scripts/n_state_model/populations.py 
(original)
+++ 1.3/test_suite/system_tests/scripts/n_state_model/populations.py Fri Jul  
2 10:59:20 2010
@@ -58,7 +58,7 @@
     frq.set(id=align_list[i], frq=799.75376122 * 1e6)
 
 # Set the paramagnetic centre.
-pcs.centre([ -14.845,    0.969,    0.265])
+paramag.centre([ -14.845,    0.969,    0.265])
 
 
 # The solution.