Author: bugman
Date: Mon Dec 27 17:06:43 2010
New Revision: 11978
URL: http://svn.gna.org/viewcvs/relax?rev=11978&view=rev
Log:
Created an about window for the automatic model-free analysis.
This will be a scrolled about window in the end to be able to view all the
text.
Modified:
branches/bieri_gui/gui_bieri/analyses/auto_model_free.py
Modified: branches/bieri_gui/gui_bieri/analyses/auto_model_free.py
URL:
http://svn.gna.org/viewcvs/relax/branches/bieri_gui/gui_bieri/analyses/auto_model_free.py?rev=11978&r1=11977&r2=11978&view=diff
==============================================================================
--- branches/bieri_gui/gui_bieri/analyses/auto_model_free.py (original)
+++ branches/bieri_gui/gui_bieri/analyses/auto_model_free.py Mon Dec 27
17:06:43 2010
@@ -27,20 +27,22 @@
# Python module imports.
import __main__
from os import getcwd, sep
-from string import replace
+from string import replace, split
import sys
import thread
import time
import wx
# relax module imports.
-from auto_analyses.dauvergne_protocol import dAuvergne_protocol
+from auto_analyses import dauvergne_protocol
from data import Relax_data_store; ds = Relax_data_store()
+from doc_builder import LIST, PARAGRAPH, SECTION, SUBSECTION, TITLE
from relax_io import DummyFileObject
from status import Status
# relax GUI module imports.
+from gui_bieri.about import About_base
from gui_bieri.analyses.results_analysis import model_free_results,
see_results
from gui_bieri.analyses.select_model_calc import Select_tensor
from gui_bieri.base_classes import Container
@@ -50,6 +52,70 @@
from gui_bieri.filedialog import opendir, openfile
from gui_bieri.message import error_message, missing_data
from gui_bieri import paths
+
+
+class About_window(About_base):
+ """The model-free about window."""
+
+ # The relax background colour.
+ colour1 = '#e5feff'
+ colour2 = '#88cbff'
+
+ # Dimensions.
+ dim_x = 800
+ dim_y = 800
+ max_y = 3000
+
+ # Spacer size (px).
+ border = 10
+
+ def __init__(self, parent):
+ """Set up the user function class."""
+
+ # Execute the base class method.
+ super(About_window, self).__init__(parent, id=-1, title="Automatic
model-free analysis about window")
+
+
+ def build_widget(self):
+ """Build the dialog using the dauvergne_protocol docstring."""
+
+ # The text width (number of characters).
+ width = 125
+
+ # Loop over the lines.
+ for i in range(len(dauvergne_protocol.doc)):
+ # The level and text.
+ level, text = dauvergne_protocol.doc[i]
+
+ # The title.
+ if level == TITLE:
+ self.draw_title(text, point_size=18)
+
+ # The section.
+ elif level == SECTION:
+ self.draw_title(text, point_size=14)
+
+ # The section.
+ elif level == SUBSECTION:
+ self.draw_title(text, point_size=12)
+
+ # Paragraphs.
+ elif level == PARAGRAPH:
+ self.draw_wrapped_text(text, width=width)
+
+ # Lists.
+ elif level == LIST:
+ # Start of list.
+ if i and dauvergne_protocol.doc[i-1][0] != LIST:
+ self.offset(10)
+
+ # The text.
+ self.draw_wrapped_text(" - %s" % text, width=width)
+
+ # End of list.
+ if i < len(dauvergne_protocol.doc) and
dauvergne_protocol.doc[i+1][0] == PARAGRAPH:
+ self.offset(10)
+
class Auto_model_free:
@@ -95,6 +161,20 @@
self.parent.SetFont(wx.Font(8, wx.DEFAULT, wx.NORMAL, wx.NORMAL, 0,
""))
+ def _about(self, event):
+ """The about window.
+
+ @param event: The wx event.
+ @type event: wx event
+ """
+
+ # Initialise the dialog.
+ dialog = About_window(self.parent)
+
+ # Show the dialog.
+ dialog.Show()
+
+
def add_execute_relax(self, box):
"""Create and add the relax execution GUI element to the given box.
@@ -148,19 +228,19 @@
# Sizer.
sizer = wx.BoxSizer(wx.HORIZONTAL)
-
+
# Text.
label_maxiter = wx.StaticText(self.parent, -1, "Maximum
interations:")
label_maxiter.SetMinSize((240, 17))
sizer.Add(label_maxiter, 0,
wx.ADJUST_MINSIZE|wx.ALIGN_CENTER_VERTICAL, 0)
-
+
# Spinner.
self.max_iter = wx.SpinCtrl(self.parent, -1, self.data.max_iter,
min=25, max=100)
sizer.Add(self.max_iter, 0,
wx.ADJUST_MINSIZE|wx.ALIGN_CENTER_VERTICAL, 0)
-
+
# Add the element to the box.
box.Add(sizer, 1, wx.EXPAND, 0)
-
+
def add_mf_models(self, box):
"""Create and add the model-free model picking GUI element to the
given box.
@@ -728,12 +808,17 @@
button = wx.lib.buttons.ThemedGenBitmapTextButton(self.parent, -1,
None, "About")
button.SetBitmapLabel(wx.Bitmap(paths.icon_22x22.about,
wx.BITMAP_TYPE_ANY))
button.SetToolTipString("Information about this automatic analysis")
- button_sizer.Add(button, 0, 0, 0)
- left_box.Add(button_sizer, 0, wx.ALL, 0)
+
+ # Bind the click.
+ self.parent.Bind(wx.EVT_BUTTON, self._about, button)
# A cursor for the button.
cursor = wx.StockCursor(wx.CURSOR_QUESTION_ARROW)
button.SetCursor(cursor)
+
+ # Pack the button.
+ button_sizer.Add(button, 0, 0, 0)
+ left_box.Add(button_sizer, 0, wx.ALL, 0)
# Spacer.
left_box.AddSpacer(10)
@@ -903,7 +988,7 @@
time.sleep(0.5)
# Start the protocol.
- dAuvergne_protocol(save_dir=data.save_dir,
diff_model=global_model, mf_models=data.mf_models,
local_tm_models=data.local_tm_models, pdb_file=data.structure_file,
seq_args=data.seq_args, het_name=data.het_name, relax_data=data.relax_data,
unres=data.unres, exclude=data.exclude, bond_length=data.bond_length,
csa=data.csa, hetnuc=data.hetnuc, proton=data.proton, grid_inc=data.inc,
min_algor=data.min_algor, mc_num=data.mc_num, max_iter=data.max_iter,
conv_loop=data.conv_loop)
+ dauvergne_protocol.dAuvergne_protocol(save_dir=data.save_dir,
diff_model=global_model, mf_models=data.mf_models,
local_tm_models=data.local_tm_models, pdb_file=data.structure_file,
seq_args=data.seq_args, het_name=data.het_name, relax_data=data.relax_data,
unres=data.unres, exclude=data.exclude, bond_length=data.bond_length,
csa=data.csa, hetnuc=data.hetnuc, proton=data.proton, grid_inc=data.inc,
min_algor=data.min_algor, mc_num=data.mc_num, max_iter=data.max_iter,
conv_loop=data.conv_loop)
# Feedback about success.
str = 'Successfully calculated the %s global model.' %
global_model
@@ -916,7 +1001,7 @@
time.sleep(3)
results_analysis = model_free_results(self, data.save_dir,
data.structure_file)
-
+
# Add grace plots to results tab.
directory = data.save_dir+sep+'final'
self.gui.list_modelfree.Append(directory+sep+'grace'+sep+'s2.agr')
@@ -925,7 +1010,7 @@
self.gui.list_modelfree.Append(directory+sep+'s2.pml')
self.gui.list_modelfree.Append(directory+sep+'rex.pml')
self.gui.list_modelfree.Append('Table_of_Results')
-
+
# Add results to relax data storage.
ds.relax_gui.results_model_free.append(directory+sep+'grace'+sep+'s2.agr')
ds.relax_gui.results_model_free.append(directory+sep+'Model-free_Results.txt')
@@ -1133,7 +1218,7 @@
# Download from the store.
obj.SetValue(self.data.model_toggle[i])
-
+
# The structure file.
if upload:
self.data.structure_file =
str(self.textctrl_structure.GetValue())
r11978 - /branches/bieri_gui/gui_bieri/analyses/auto_model_free.py