mailr12156 - /website/download.html


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Posted by edward on January 04, 2011 - 16:50:
Author: bugman
Date: Tue Jan  4 16:50:06 2011
New Revision: 12156

URL: http://svn.gna.org/viewcvs/relax?rev=12156&view=rev
Log:
Added a section explaining the relax dependencies to the 
http://www.nmr-relax.com/download.html page.


Modified:
    website/download.html

Modified: website/download.html
URL: 
http://svn.gna.org/viewcvs/relax/website/download.html?rev=12156&r1=12155&r2=12156&view=diff
==============================================================================
--- website/download.html (original)
+++ website/download.html Tue Jan  4 16:50:06 2011
@@ -76,6 +76,19 @@
       <p>relax binaries have been pre-compiled for a number of computer 
architectures.  These are based on Python 2.5 or 2.6 but can work with Python 
2.4 on certain operating systems and certain architectures.  However if not, 
or if binaries for your system do not exist, please download the source 
release (the compilation of binaries is not a pre-requesite for using relax). 
 Note that some binary distribution files may not correspond to the most up 
to date version of relax.  If so, please download the up-to-date source 
release instead.  If you would like to contribute binary packages for your 
specific architecture, please read the 'Open source infrastructure' chapter 
of the relax manual for details.</p>
 
       <p>For details about the relax GPG signatures and their usage, see the 
Security section at the end of this page.</p>
+
+      <h3>Dependencies</h3>
+
+      <p>Minimally both <a href="http://python.org";>Python</a> and <a 
href="http://numpy.scipy.org/";>NumPy</a> (Numerical Python) need to be 
installed on the system for relax to run.  A few other Python packages are 
optional and relax will function perfectly well without these, although 
certain features may be missing.</p>
+
+      <h4>Scientific python</h4>
+
+      <p>relax has an inbuilt PDB reader.  However, due to the diversity of 
the PDB with many files not conforming to the standard, this reader many not 
function for all files.  An alternative is to use the more advanced PDB 
reader that comes with <a 
href="http://sourcesup.cru.fr/projects/scientific-py/";>Scientific 
Python</a>.</p>
+
+      <h4>SciPy</h4>
+
+      <p>Numerical integration is required for the frame order theory.  This 
is currently not implemented within relax so the QUADPACK numerical 
integration provided by <a href="http://www.scipy.org/";>SciPy</a> is used.  
Without this package being installed, the frame order analysis will not be 
accessible.</p>
+
     </div>
 
 




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