r13303 - in /branches/gui_testing/test_suite/gui_tests: __init__.py rx.py -- June 29, 2011 - 15:55

Author: bugman
Date: Wed Jun 29 15:55:14 2011
New Revision: 13303

URL: http://svn.gna.org/viewcvs/relax?rev=13303&view=rev
Log:
Created a GUI test for the auto R1 analysis.

This is not complete yet, and is still checking for NOE data.


Added:
    branches/gui_testing/test_suite/gui_tests/rx.py
      - copied, changed from r13301, 
branches/gui_testing/test_suite/gui_tests/noe.py
Modified:
    branches/gui_testing/test_suite/gui_tests/__init__.py

Modified: branches/gui_testing/test_suite/gui_tests/__init__.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/gui_testing/test_suite/gui_tests/__init__.py?rev=13303&r1=13302&r2=13303&view=diff
==============================================================================
--- branches/gui_testing/test_suite/gui_tests/__init__.py (original)
+++ branches/gui_testing/test_suite/gui_tests/__init__.py Wed Jun 29 15:55:14 
2011
@@ -33,10 +33,12 @@
 
 # relax GUI test module imports.
 from noe import Noe
+from rx import Rx
 from test_suite.relax_test_loader import RelaxTestLoader as TestLoader
 
 
-__all__ = ['noe']
+__all__ = ['noe',
+           'rx']
 
 
 class GUI_test_runner:
@@ -76,6 +78,7 @@
         # All tests.
         if not tests:
             suite_array.append(TestLoader().loadTestsFromTestCase(Noe))
+            suite_array.append(TestLoader().loadTestsFromTestCase(Rx))
 
         # Group all tests together.
         full_suite = TestSuite(suite_array)

Copied: branches/gui_testing/test_suite/gui_tests/rx.py (from r13301, 
branches/gui_testing/test_suite/gui_tests/noe.py)
URL: 
http://svn.gna.org/viewcvs/relax/branches/gui_testing/test_suite/gui_tests/rx.py?p2=branches/gui_testing/test_suite/gui_tests/rx.py&p1=branches/gui_testing/test_suite/gui_tests/noe.py&r1=13301&r2=13303&rev=13303&view=diff
==============================================================================
--- branches/gui_testing/test_suite/gui_tests/noe.py (original)
+++ branches/gui_testing/test_suite/gui_tests/rx.py Wed Jun 29 15:55:14 2011
@@ -40,11 +40,11 @@
 # relax GUI imports.
 if dep_check.wx_module:
     from gui.relax_gui import Main
-from gui.misc import str_to_gui
+from gui.misc import float_to_gui, int_to_gui, str_to_gui
 
 
-class Noe(TestCase):
-    """Class for testing various aspects specific to the NOE analysis."""
+class Rx(TestCase):
+    """Class for testing various aspects specific to the R1 and R2 
analyses."""
 
     def setUp(self):
         """Set up for all the functional tests."""
@@ -72,17 +72,20 @@
         self.gui.Destroy()
 
 
-    def test_noe_analysis(self):
-        """Test the NOE analysis."""
+    def test_r1_analysis(self):
+        """Test the r1 analysis."""
+
+        # The path to the data files.
+        data_path = status.install_path + sep + 'test_suite' + sep + 
'shared_data' + sep + 'curve_fitting'
 
         # Directly set up the analysis.
-        self.gui.analysis.new_analysis(analysis_type='noe', 
analysis_name="Steady-state NOE test", pipe_name='noe test')
+        self.gui.analysis.new_analysis(analysis_type='r1', analysis_name="R1 
relaxation test", pipe_name='r1 test')
 
         # Alias the page.
-        page = self.gui.analysis.get_page_from_name("Steady-state NOE test")
+        page = self.gui.analysis.get_page_from_name("R1 relaxation test")
 
         # The frequency label.
-        page.field_nmr_frq.SetValue(str_to_gui('500'))
+        page.field_nmr_frq.SetValue(str_to_gui('600'))
 
         # Change the results directory.
         page.field_results_dir.SetValue(str_to_gui(ds.tmpdir))
@@ -92,19 +95,46 @@
         page.field_sequence.SetValue(str_to_gui(file))
 
         # Unresolved spins.
-        page.field_unresolved.SetValue(str_to_gui('3'))
+        page.field_unresolved.SetValue(str_to_gui("3, 11, 18, 19, 23, 31, 
42, 44, 54, 66, 82, 92, 94, 99, 101, 113, 124, 126, 136, 141, 145, 147, 332, 
345, 346, 358, 361"))
 
-        # The reference spectrum.
-        file = status.install_path + sep + 'test_suite' + sep + 
'shared_data' + sep + 'peak_lists' + sep + 'ref_ave.list'
-        page.field_ref_noe.SetValue(str_to_gui(file))
+        # Spectrum names.
+        names = [
+            'T2_ncyc1_ave',
+            'T2_ncyc1b_ave',
+            'T2_ncyc2_ave',
+            'T2_ncyc4_ave',
+            'T2_ncyc4b_ave',
+            'T2_ncyc6_ave',
+            'T2_ncyc9_ave',
+            'T2_ncyc9b_ave',
+            'T2_ncyc11_ave',
+            'T2_ncyc11b_ave'
+        ]
 
-        # The sat spectrum.
-        file = status.install_path + sep + 'test_suite' + sep + 
'shared_data' + sep + 'peak_lists' + sep + 'sat_ave.list'
-        page.field_sat_noe.SetValue(str_to_gui(file))
+        # Number of cycles.
+        ncyc = [1,
+                1,
+                2,
+                4,
+                4,
+                6,
+                9,
+                9,
+                11,
+                11
+        ]
 
-        # Set the errors.
-        page.field_ref_rmsd.SetValue(str_to_gui('3600'))
-        page.field_sat_rmsd.SetValue(str_to_gui('3000'))
+        # Set the delay time.
+        page.peak_intensity.delay_time.SetValue(float_to_gui(0.0176))
+
+        # Add the spectra and number of cycles.
+        for i in range(len(names)):
+            # The spectrum.
+            file = data_path + sep + names[i]
+            page.peak_intensity.grid.SetCellValue(i, 0, str_to_gui(file))
+
+            # The number of cycles.
+            page.peak_intensity.grid.SetCellValue(i, 1, int_to_gui(ncyc[i]))
 
         # Set the proton name.
         ds.relax_gui.global_setting[3] = 'HN'
@@ -147,4 +177,4 @@
             i += 1
 
         # Check the created files.
-        self.assert_(access(ds.tmpdir+sep+'grace'+sep+'noe.agr', F_OK))
+        self.assert_(access(ds.tmpdir+sep+'grace'+sep+'r1.agr', F_OK))