Author: bugman
Date: Tue Aug 2 16:27:15 2011
New Revision: 14070
URL: http://svn.gna.org/viewcvs/relax?rev=14070&view=rev
Log:
Merged revisions 13951,13956,13958,13961,13983-13984,14008-14009,14011,14013
via svnmerge from
svn+ssh://bugman@xxxxxxxxxxx/svn/relax/1.3
........
r13951 | bugman | 2011-07-28 15:14:55 +0200 (Thu, 28 Jul 2011) | 7 lines
Redesign of the main relax module.
The module has been renamed to 'relax.py', and the original file 'relax' is
now a very basic python
script which simply loads the module and runs the new start() function for
launching relax. The MS
Windows BAT file has also been updated to feed the module into python.
........
r13956 | bugman | 2011-07-28 16:26:16 +0200 (Thu, 28 Jul 2011) | 3 lines
The relax mode normally specified by the command line can now be overridden.
........
r13958 | bugman | 2011-07-28 16:35:58 +0200 (Thu, 28 Jul 2011) | 3 lines
Removed the executable svn property on the info module.
........
r13961 | bugman | 2011-07-28 16:53:26 +0200 (Thu, 28 Jul 2011) | 3 lines
Fix for the overriding of the command line specified mode - the args must
be processed anyway.
........
r13983 | bugman | 2011-07-29 09:59:57 +0200 (Fri, 29 Jul 2011) | 3 lines
Created a basic system test checking the reading of a non-PDB file by
structure.read_pdb.
........
r13984 | bugman | 2011-07-29 10:06:14 +0200 (Fri, 29 Jul 2011) | 5 lines
Fix for structure.read_pdb for when the file contains no PDB data.
This is now caught, and a warning is given and the function exists cleanly.
........
r14008 | bugman | 2011-07-29 18:36:30 +0200 (Fri, 29 Jul 2011) | 3 lines
Shifted the pedantic flag into the status object.
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r14009 | bugman | 2011-07-29 18:37:15 +0200 (Fri, 29 Jul 2011) | 3 lines
RelaxWarnings now only show a traceback when the pedantic flag is True.
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r14011 | bugman | 2011-07-29 19:01:35 +0200 (Fri, 29 Jul 2011) | 5 lines
The relax state is now saved on a RelaxError when the pedantic rather than
debugging flag is turned on.
As both flags can be given, this allows for this state saving to be
activated or deactivated.
........
r14013 | bugman | 2011-07-29 19:08:13 +0200 (Fri, 29 Jul 2011) | 3 lines
The relax_io.read_spin_data() function no longer skips short lines so that
a warning is given for it.
........
Added:
branches/xyz/relax.py
- copied unchanged from r14013, 1.3/relax.py
Modified:
branches/xyz/ (props changed)
branches/xyz/generic_fns/structure/internal.py
branches/xyz/relax
branches/xyz/relax.bat
branches/xyz/relax_errors.py
branches/xyz/relax_io.py
branches/xyz/relax_warnings.py
branches/xyz/status.py
branches/xyz/test_suite/system_tests/structure.py
[This mail would be too long, it was shortened to contain the URLs only.]
Modified: branches/xyz/generic_fns/structure/internal.py
URL:
http://svn.gna.org/viewcvs/relax/branches/xyz/generic_fns/structure/internal.py?rev=14070&r1=14069&r2=14070&view=diff
Modified: branches/xyz/relax
URL:
http://svn.gna.org/viewcvs/relax/branches/xyz/relax?rev=14070&r1=14069&r2=14070&view=diff
Modified: branches/xyz/relax.bat
URL:
http://svn.gna.org/viewcvs/relax/branches/xyz/relax.bat?rev=14070&r1=14069&r2=14070&view=diff
Modified: branches/xyz/relax_errors.py
URL:
http://svn.gna.org/viewcvs/relax/branches/xyz/relax_errors.py?rev=14070&r1=14069&r2=14070&view=diff
Modified: branches/xyz/relax_io.py
URL:
http://svn.gna.org/viewcvs/relax/branches/xyz/relax_io.py?rev=14070&r1=14069&r2=14070&view=diff
Modified: branches/xyz/relax_warnings.py
URL:
http://svn.gna.org/viewcvs/relax/branches/xyz/relax_warnings.py?rev=14070&r1=14069&r2=14070&view=diff
Modified: branches/xyz/status.py
URL:
http://svn.gna.org/viewcvs/relax/branches/xyz/status.py?rev=14070&r1=14069&r2=14070&view=diff
Modified: branches/xyz/test_suite/system_tests/structure.py
URL:
http://svn.gna.org/viewcvs/relax/branches/xyz/test_suite/system_tests/structure.py?rev=14070&r1=14069&r2=14070&view=diff
r14070 - in /branches/xyz: ./ generic_fns/structure/ test_suite/system_tests/