Author: bugman Date: Tue Nov 8 11:20:57 2011 New Revision: 14982 URL: http://svn.gna.org/viewcvs/relax?rev=14982&view=rev Log: Added a system test script for the iso cone, free rotor frame order test data. Added: 1.3/test_suite/system_tests/scripts/frame_order/cam/iso_cone_free_rotor.py - copied, changed from r14974, 1.3/test_suite/system_tests/scripts/frame_order/cam/rotor2.py Copied: 1.3/test_suite/system_tests/scripts/frame_order/cam/iso_cone_free_rotor.py (from r14974, 1.3/test_suite/system_tests/scripts/frame_order/cam/rotor2.py) URL: http://svn.gna.org/viewcvs/relax/1.3/test_suite/system_tests/scripts/frame_order/cam/iso_cone_free_rotor.py?p2=1.3/test_suite/system_tests/scripts/frame_order/cam/iso_cone_free_rotor.py&p1=1.3/test_suite/system_tests/scripts/frame_order/cam/rotor2.py&r1=14974&r2=14982&rev=14982&view=diff ============================================================================== --- 1.3/test_suite/system_tests/scripts/frame_order/cam/rotor2.py (original) +++ 1.3/test_suite/system_tests/scripts/frame_order/cam/iso_cone_free_rotor.py Tue Nov 8 11:20:57 2011 @@ -1,4 +1,4 @@ -# Script for optimising the second rotor frame order test model of CaM. +# Script for optimising the ico cone, free rotor frame order test model of CaM. # Python module imports. from numpy import array, float64, transpose, zeros @@ -40,7 +40,7 @@ # The file paths. PATH_N_DOM = DATA_PATH - PATH_C_DOM = PATH_N_DOM+sep+'rotor2'+sep + PATH_C_DOM = PATH_N_DOM+sep+'iso_cone_free_rotor'+sep # Create the data pipe. pipe.create(pipe_name='frame order', pipe_type='frame order') @@ -58,22 +58,28 @@ align_tensor.reduction(full_tensor=full[i], red_tensor=red[i]) # Select the model. - frame_order.select_model('rotor') + frame_order.select_model('iso cone, free rotor') # Set the reference domain. frame_order.ref_domain('N') # Set the parameters to that after a 11 increment grid search (for a massive speed up). - value.set(val=1.7136, param='ave_pos_alpha') value.set(val=0.0, param='ave_pos_beta') value.set(val=0.0, param='ave_pos_gamma') - value.set(val=1.7136, param='eigen_alpha') - value.set(val=0.0, param='eigen_beta') - value.set(val=1.7136, param='eigen_gamma') - value.set(val=1.3138, param='cone_sigma_max') + value.set(val=0.0, param='axis_theta') + value.set(val=0.0, param='axis_phi') + value.set(val=0.4375, param='cone_s1') # Optimise. minimise('simplex', constraints=False) + + # Test Monte Carlo simulations. + monte_carlo.setup(number=3) + monte_carlo.create_data() + monte_carlo.initial_values() + minimise('simplex', constraints=False) + eliminate() + monte_carlo.error_analysis() # Write the results. results.write('devnull', dir=None, force=True)