r16063 - /branches/uf_redesign/user_functions/diffusion_tensor.py -- May 07, 2012 - 17:32

Author: bugman
Date: Mon May  7 17:32:28 2012
New Revision: 16063

URL: http://svn.gna.org/viewcvs/relax?rev=16063&view=rev
Log:
Improvements for the diffusion_tensor.init user function data setup.


Modified:
    branches/uf_redesign/user_functions/diffusion_tensor.py

Modified: branches/uf_redesign/user_functions/diffusion_tensor.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/uf_redesign/user_functions/diffusion_tensor.py?rev=16063&r1=16062&r2=16063&view=diff
==============================================================================
--- branches/uf_redesign/user_functions/diffusion_tensor.py (original)
+++ branches/uf_redesign/user_functions/diffusion_tensor.py Mon May  7 
17:32:28 2012
@@ -190,7 +190,7 @@
 
     1 / tm = 6Diso.
 """],
-[" The spheroid (axially symmetric diffusion)", """
+["The spheroid (axially symmetric diffusion)", """
 When two of the three eigenvalues of the diffusion tensor are equal, the 
molecule diffuses as a spheroid.  Four pieces of information are required to 
specify this tensor, the two geometric parameters, Diso and Da, and the two 
orientational parameters, the polar angle theta and the azimuthal angle phi 
describing the orientation of the axis of symmetry.  The correlation function 
of the global diffusion is
 
 -----
@@ -241,7 +241,7 @@
 
 The 'spheroid_type' argument should be 'oblate', 'prolate', or None.  The 
argument will be ignored if the diffusion tensor is not axially symmetric.  
If 'oblate' is given, then the constraint Da <= 0 is used while if 'prolate' 
is given, then the constraint Da >= 0 is used.  If nothing is supplied, then 
Da will be allowed to have any values.  To prevent minimisation of diffusion 
tensor parameters in a space with two minima, it is recommended to specify 
which tensor is to be minimised, thereby partitioning the two minima into the 
two subspaces along the boundary Da = 0.
 """],
-[" The ellipsoid (rhombic diffusion)", """
+["The ellipsoid (rhombic diffusion)", """
 When all three eigenvalues of the diffusion tensor are different, the 
molecule diffuses as an ellipsoid.  This diffusion is also known as fully 
anisotropic, asymmetric, or rhombic. The full tensor is specified by six 
pieces of information, the three geometric parameters Diso, Da, and Dr 
representing the isotropic, anisotropic, and rhombic components of the 
tensor, and the three Euler angles alpha, beta, and gamma orienting the 
tensor within the PDB frame.  The correlation function is
 
 
@@ -353,4 +353,6 @@
 uf.backend = diffusion_tensor.init
 uf.menu_text = "&init"
 uf.gui_icon = "relax.diff_tensor"
+uf.wizard_size = (1000, 900)
+uf.wizard_height_desc = 500
 uf.wizard_image = WIZARD_IMAGE_PATH + 'diff_tensor.png'