Author: bugman Date: Tue Jul 10 20:43:53 2012 New Revision: 17226 URL: http://svn.gna.org/viewcvs/relax?rev=17226&view=rev Log: More GPL v3 license updates. Modified: trunk/ansi.py trunk/arg_check.py trunk/auto_analyses/__init__.py trunk/auto_analyses/dauvergne_protocol.py trunk/auto_analyses/noe.py trunk/auto_analyses/relax_fit.py trunk/auto_analyses/stereochem_analysis.py trunk/colour.py trunk/data/__init__.py trunk/data/align_tensor.py trunk/data/data_classes.py trunk/data/diff_tensor.py trunk/data/exp_info.py trunk/data/gui.py trunk/data/interatomic.py trunk/data/mol_res_spin.py trunk/data/pipe_container.py trunk/data/prototype.py trunk/data/relax_xml.py trunk/dep_check.py trunk/docs/__init__.py trunk/docs/latex/__init__.py trunk/docs/latex/fetch_docstrings.py trunk/extern/__init__.py trunk/float.py trunk/generic_fns/__init__.py trunk/generic_fns/align_tensor.py trunk/generic_fns/angles.py trunk/generic_fns/bmrb.py trunk/generic_fns/bruker.py trunk/generic_fns/dasha.py trunk/generic_fns/diffusion_tensor.py trunk/generic_fns/dipole_pair.py trunk/generic_fns/eliminate.py trunk/generic_fns/exp_info.py trunk/generic_fns/fix.py trunk/generic_fns/frame_order.py trunk/generic_fns/frq.py trunk/generic_fns/grace.py trunk/generic_fns/interatomic.py trunk/generic_fns/minimise.py trunk/generic_fns/model_selection.py trunk/generic_fns/mol_res_spin.py trunk/generic_fns/molmol.py trunk/generic_fns/monte_carlo.py trunk/generic_fns/noesy.py trunk/generic_fns/palmer.py trunk/generic_fns/paramag.py trunk/generic_fns/pcs.py trunk/generic_fns/pipes.py trunk/generic_fns/pymol_control.py trunk/generic_fns/rdc.py trunk/generic_fns/relax_data.py trunk/generic_fns/relax_re.py trunk/generic_fns/reset.py trunk/generic_fns/results.py trunk/generic_fns/script.py trunk/generic_fns/selection.py trunk/generic_fns/sequence.py trunk/generic_fns/spectrum.py trunk/generic_fns/state.py trunk/generic_fns/structure/__init__.py trunk/generic_fns/structure/api_base.py trunk/generic_fns/structure/cones.py trunk/generic_fns/structure/geometric.py trunk/generic_fns/structure/internal.py trunk/generic_fns/structure/main.py trunk/generic_fns/structure/mass.py trunk/generic_fns/structure/scientific.py trunk/generic_fns/structure/superimpose.py trunk/generic_fns/sys_info.py trunk/generic_fns/temperature.py trunk/generic_fns/value.py trunk/generic_fns/vmd.py trunk/generic_fns/xplor.py trunk/graphics/__init__.py trunk/gui/__init__.py trunk/gui/about.py trunk/gui/analyses/__init__.py trunk/gui/analyses/auto_model_free.py trunk/gui/analyses/auto_noe.py trunk/gui/analyses/auto_r1.py trunk/gui/analyses/auto_r2.py trunk/gui/analyses/auto_rx_base.py trunk/gui/analyses/base.py trunk/gui/analyses/elements.py trunk/gui/analyses/execute.py trunk/gui/analyses/results_analysis.py trunk/gui/analyses/wizard.py trunk/gui/base_classes.py trunk/gui/components/__init__.py trunk/gui/components/base_list.py trunk/gui/components/citations.py trunk/gui/components/conversion.py trunk/gui/components/free_file_format.py trunk/gui/components/grid.py trunk/gui/components/menu.py trunk/gui/components/molecule.py trunk/gui/components/relax_data.py trunk/gui/components/relax_data_meta.py trunk/gui/components/scripts.py trunk/gui/components/software.py trunk/gui/components/spectrum.py trunk/gui/controller.py trunk/gui/errors.py trunk/gui/export_bmrb.py trunk/gui/filedialog.py trunk/gui/fonts.py trunk/gui/icons.py trunk/gui/input_elements/__init__.py trunk/gui/input_elements/bool.py trunk/gui/input_elements/combo_list.py trunk/gui/input_elements/dir.py trunk/gui/input_elements/file.py trunk/gui/input_elements/sequence.py trunk/gui/input_elements/sequence_2D.py trunk/gui/input_elements/spin_id.py trunk/gui/input_elements/value.py trunk/gui/interpreter.py trunk/gui/menu.py trunk/gui/message.py trunk/gui/misc.py trunk/gui/paths.py trunk/gui/pipe_editor.py trunk/gui/references.py trunk/gui/relax_gui.py trunk/gui/relax_prompt.py trunk/gui/results_viewer.py trunk/gui/spin_viewer/__init__.py trunk/gui/spin_viewer/containers.py trunk/gui/spin_viewer/frame.py trunk/gui/spin_viewer/splitter.py trunk/gui/spin_viewer/tree.py trunk/gui/string_conv.py trunk/gui/uf_objects.py trunk/gui/wizard.py trunk/info.py trunk/maths_fns/__init__.py trunk/maths_fns/alignment_tensor.py trunk/maths_fns/c_chi2.c trunk/maths_fns/c_chi2.h trunk/maths_fns/chi2.py trunk/maths_fns/consistency_tests.py trunk/maths_fns/coord_transform.py trunk/maths_fns/correlation_time.py trunk/maths_fns/direction_cosine.py trunk/maths_fns/exponential.c trunk/maths_fns/exponential.h trunk/maths_fns/frame_order.py trunk/maths_fns/frame_order_matrix_ops.py trunk/maths_fns/jw_mapping.py trunk/maths_fns/jw_mf.py trunk/maths_fns/jw_mf_comps.py trunk/maths_fns/kronecker_product.py trunk/maths_fns/mf.py trunk/maths_fns/n_state_model.py trunk/maths_fns/order_parameters.py trunk/maths_fns/paramag_centre.py trunk/maths_fns/pcs.py trunk/maths_fns/potential.py trunk/maths_fns/pseudo_ellipse.py trunk/maths_fns/rdc.py trunk/maths_fns/relax_fit.c trunk/maths_fns/relax_fit.h trunk/maths_fns/ri.py trunk/maths_fns/ri_comps.py trunk/maths_fns/ri_prime.py trunk/maths_fns/rotation_matrix.py trunk/maths_fns/weights.py trunk/multi/__init__.py trunk/multi/memo.py trunk/multi/misc.py trunk/multi/mpi4py_processor.py trunk/multi/multi_processor_base.py trunk/multi/processor.py trunk/multi/processor_io.py trunk/multi/result_commands.py trunk/multi/result_queue.py trunk/multi/slave_commands.py trunk/multi/uni_processor.py trunk/opendx/__init__.py trunk/opendx/base_map.py trunk/opendx/isosurface_3D.py trunk/opendx/main.py trunk/physical_constants.py trunk/prompt/__init__.py trunk/prompt/command.py trunk/prompt/doc_string.py trunk/prompt/gpl.py trunk/prompt/help.py trunk/prompt/interpreter.py trunk/prompt/tab_completion.py trunk/prompt/uf_docstring.py trunk/prompt/uf_objects.py trunk/relax.py trunk/relax_errors.py trunk/relax_io.py trunk/relax_string.py trunk/relax_warnings.py trunk/sample_scripts/angles.py trunk/sample_scripts/consistency_tests.py trunk/sample_scripts/diff_tensor_pdb.py trunk/sample_scripts/generate_ri.py trunk/sample_scripts/jw_mapping.py trunk/sample_scripts/model_free/bmrb_deposition.py trunk/sample_scripts/model_free/cv.py trunk/sample_scripts/model_free/dasha.py trunk/sample_scripts/model_free/dauvergne_protocol.py trunk/sample_scripts/model_free/diff_min.py trunk/sample_scripts/model_free/grace_S2_vs_te.py trunk/sample_scripts/model_free/grace_ri_data_correlation.py trunk/sample_scripts/model_free/map.py trunk/sample_scripts/model_free/mf_multimodel.py trunk/sample_scripts/model_free/modsel.py trunk/sample_scripts/model_free/molmol_plot.py trunk/sample_scripts/model_free/palmer.py trunk/sample_scripts/model_free/remap.py trunk/sample_scripts/model_free/single_model.py trunk/sample_scripts/model_free/table_csv.py trunk/sample_scripts/model_free/table_latex.py trunk/sample_scripts/n_state_model/conformation_analysis_rdc+pcs.py trunk/sample_scripts/n_state_model/local_min_search.py trunk/sample_scripts/n_state_model/two_domain.py trunk/sample_scripts/noe.py trunk/sample_scripts/relax_curve_diff.py trunk/sample_scripts/relax_fit.py trunk/sample_scripts/stereochem_analysis.py trunk/sample_scripts/xh_vector_dist.py trunk/scons/__init__.py trunk/scons/distrib.py trunk/scons/install.py trunk/scons/manuals.py trunk/sconstruct trunk/scripts/gui/about_gui.py trunk/scripts/gui/about_model_free.py trunk/scripts/gui/about_relax.py trunk/scripts/gui/refs.py trunk/scripts/gui/spin_create.py trunk/scripts/gui/uf_sequence_read.py trunk/setup.py trunk/specific_fns/__init__.py trunk/specific_fns/api_base.py trunk/specific_fns/api_common.py trunk/specific_fns/api_objects.py trunk/specific_fns/consistency_tests.py trunk/specific_fns/frame_order.py trunk/specific_fns/hybrid.py trunk/specific_fns/jw_mapping.py trunk/specific_fns/model_free/__init__.py trunk/specific_fns/model_free/bmrb.py trunk/specific_fns/model_free/macro_base.py trunk/specific_fns/model_free/main.py trunk/specific_fns/model_free/mf_minimise.py trunk/specific_fns/model_free/molmol.py trunk/specific_fns/model_free/multi_processor_commands.py trunk/specific_fns/model_free/pymol.py trunk/specific_fns/model_free/results.py trunk/specific_fns/n_state_model.py trunk/specific_fns/noe/__init__.py trunk/specific_fns/noe/main.py trunk/specific_fns/relax_fit.py trunk/specific_fns/setup.py trunk/status.py trunk/test_suite/__init__.py trunk/test_suite/formatting.py trunk/test_suite/gui_tests/__init__.py trunk/test_suite/gui_tests/base_classes.py trunk/test_suite/gui_tests/bmrb.py trunk/test_suite/gui_tests/consistency_tests.py trunk/test_suite/gui_tests/dead_uf_pages.py trunk/test_suite/gui_tests/frame_order.py trunk/test_suite/gui_tests/interatomic.py trunk/test_suite/gui_tests/jw_mapping.py trunk/test_suite/gui_tests/model_free.py trunk/test_suite/gui_tests/n_state_model.py trunk/test_suite/gui_tests/noe.py trunk/test_suite/gui_tests/pipes.py trunk/test_suite/gui_tests/rx.py trunk/test_suite/gui_tests/state.py trunk/test_suite/relax_test_loader.py trunk/test_suite/relax_test_runner.py trunk/test_suite/shared_data/__init__.py trunk/test_suite/shared_data/diffusion_tensor/__init__.py trunk/test_suite/shared_data/diffusion_tensor/ellipsoid/generate_data.py trunk/test_suite/shared_data/diffusion_tensor/generate_data.py trunk/test_suite/shared_data/diffusion_tensor/sphere/generate_data.py trunk/test_suite/shared_data/diffusion_tensor/spheroid/generate_data.py trunk/test_suite/shared_data/model_free/back_calc.py trunk/test_suite/shared_data/model_free/local_tm_10_S2_0.8_te_40/generate.py trunk/test_suite/shared_data/model_free/sphere/create_ri.py trunk/test_suite/shared_data/model_free/tm0_grid/generate.py trunk/test_suite/shared_data/model_free/tm1_grid/generate.py trunk/test_suite/shared_data/model_free/tm2_grid/generate.py trunk/test_suite/shared_data/model_free/tm3_grid/generate.py trunk/test_suite/shared_data/model_free/tm4_grid/generate.py trunk/test_suite/shared_data/model_free/tm5_grid/generate.py trunk/test_suite/shared_data/model_free/tm6_grid/generate.py trunk/test_suite/shared_data/model_free/tm7_grid/generate.py trunk/test_suite/shared_data/model_free/tm8_grid/generate.py trunk/test_suite/shared_data/model_free/tm9_grid/generate.py trunk/test_suite/system_tests/__init__.py trunk/test_suite/system_tests/align_tensor.py trunk/test_suite/system_tests/angles.py trunk/test_suite/system_tests/base_classes.py trunk/test_suite/system_tests/bmrb.py trunk/test_suite/system_tests/bruker.py trunk/test_suite/system_tests/consistency_tests.py trunk/test_suite/system_tests/dasha.py trunk/test_suite/system_tests/diffusion_tensor.py trunk/test_suite/system_tests/frame_order.py trunk/test_suite/system_tests/generic.py trunk/test_suite/system_tests/grace.py trunk/test_suite/system_tests/interatomic.py trunk/test_suite/system_tests/jw_mapping.py trunk/test_suite/system_tests/load_spins.py trunk/test_suite/system_tests/model_elimination.py trunk/test_suite/system_tests/model_free.py trunk/test_suite/system_tests/model_selection.py trunk/test_suite/system_tests/mol_res_spin.py trunk/test_suite/system_tests/n_state_model.py trunk/test_suite/system_tests/noe.py trunk/test_suite/system_tests/noe_restraints.py trunk/test_suite/system_tests/palmer.py trunk/test_suite/system_tests/peak_lists.py trunk/test_suite/system_tests/pipes.py trunk/test_suite/system_tests/rdc.py trunk/test_suite/system_tests/relax_data.py trunk/test_suite/system_tests/relax_fit.py trunk/test_suite/system_tests/results.py trunk/test_suite/system_tests/scripts/bug_17276_peak_lists.py trunk/test_suite/system_tests/scripts/curve_fitting/bug_18789_no_grace_errors.py trunk/test_suite/system_tests/scripts/model_free/bug_18790_negative_error.py trunk/test_suite/system_tests/scripts/model_free/dauvergne_protocol.py trunk/test_suite/system_tests/scripts/model_free/full_analysis_trunc.py trunk/test_suite/system_tests/scripts/model_free/generate_ri.py trunk/test_suite/system_tests/scripts/model_free/latex_mf_table.py trunk/test_suite/system_tests/scripts/model_free/opt_tm0_grid.py trunk/test_suite/system_tests/scripts/model_free/opt_tm1_grid.py trunk/test_suite/system_tests/scripts/model_free/opt_tm2_grid.py trunk/test_suite/system_tests/scripts/model_free/opt_tm3_grid.py trunk/test_suite/system_tests/scripts/model_free/opt_tm4_grid.py trunk/test_suite/system_tests/scripts/model_free/opt_tm5_grid.py trunk/test_suite/system_tests/scripts/model_free/opt_tm6_grid.py trunk/test_suite/system_tests/scripts/model_free/opt_tm7_grid.py trunk/test_suite/system_tests/scripts/model_free/opt_tm8_grid.py trunk/test_suite/system_tests/scripts/model_free/opt_tm9_grid.py trunk/test_suite/system_tests/scripts/model_free/opt_tm_fns.py trunk/test_suite/system_tests/scripts/n_state_model/stereochem_analysis.py trunk/test_suite/system_tests/scripts/peak_lists/ccpn_analysis.py trunk/test_suite/system_tests/sequence.py trunk/test_suite/system_tests/state.py trunk/test_suite/system_tests/structure.py trunk/test_suite/system_tests/unit_vectors.py trunk/test_suite/test_suite_runner.py trunk/test_suite/unit_tests/__init__.py trunk/test_suite/unit_tests/_auto_analyses/__init__.py trunk/test_suite/unit_tests/_auto_analyses/test___init__.py trunk/test_suite/unit_tests/_data/__init__.py trunk/test_suite/unit_tests/_data/test___init__.py trunk/test_suite/unit_tests/_data/test_align_tensor.py trunk/test_suite/unit_tests/_data/test_diff_tensor.py trunk/test_suite/unit_tests/_data/test_mol_res_spin.py trunk/test_suite/unit_tests/_data/test_pipe_container.py trunk/test_suite/unit_tests/_generic_fns/__init__.py trunk/test_suite/unit_tests/_generic_fns/_structure/__init__.py trunk/test_suite/unit_tests/_generic_fns/_structure/test___init__.py trunk/test_suite/unit_tests/_generic_fns/_structure/test_api_base.py trunk/test_suite/unit_tests/_generic_fns/_structure/test_internal.py trunk/test_suite/unit_tests/_generic_fns/_structure/test_scientific.py trunk/test_suite/unit_tests/_generic_fns/molecule.py trunk/test_suite/unit_tests/_generic_fns/residue.py trunk/test_suite/unit_tests/_generic_fns/spin.py trunk/test_suite/unit_tests/_generic_fns/test___init__.py trunk/test_suite/unit_tests/_generic_fns/test_align_tensor.py trunk/test_suite/unit_tests/_generic_fns/test_diffusion_tensor.py trunk/test_suite/unit_tests/_generic_fns/test_mol_res_spin.py trunk/test_suite/unit_tests/_generic_fns/test_molecule.py trunk/test_suite/unit_tests/_generic_fns/test_pipes.py trunk/test_suite/unit_tests/_generic_fns/test_relax_data.py trunk/test_suite/unit_tests/_generic_fns/test_relax_re.py trunk/test_suite/unit_tests/_generic_fns/test_residue.py trunk/test_suite/unit_tests/_generic_fns/test_selection.py trunk/test_suite/unit_tests/_generic_fns/test_sequence.py trunk/test_suite/unit_tests/_generic_fns/test_spin.py trunk/test_suite/unit_tests/_generic_fns/test_state.py trunk/test_suite/unit_tests/_generic_fns/test_value.py trunk/test_suite/unit_tests/_maths_fns/__init__.py trunk/test_suite/unit_tests/_maths_fns/test___init__.py trunk/test_suite/unit_tests/_maths_fns/test_chi2.py trunk/test_suite/unit_tests/_maths_fns/test_frame_order_matrix_ops.py trunk/test_suite/unit_tests/_maths_fns/test_kronecker_product.py trunk/test_suite/unit_tests/_maths_fns/test_n_state_model.py trunk/test_suite/unit_tests/_maths_fns/test_pseudo_ellipse.py trunk/test_suite/unit_tests/_maths_fns/test_rotation_matrix.py trunk/test_suite/unit_tests/_multi/__init__.py trunk/test_suite/unit_tests/_multi/test___init__.py trunk/test_suite/unit_tests/_opendx/__init__.py trunk/test_suite/unit_tests/_opendx/test___init__.py trunk/test_suite/unit_tests/_prompt/__init__.py trunk/test_suite/unit_tests/_prompt/container.py trunk/test_suite/unit_tests/_prompt/data_types.py trunk/test_suite/unit_tests/_prompt/test___init__.py trunk/test_suite/unit_tests/_prompt/test_align_tensor.py trunk/test_suite/unit_tests/_prompt/test_dasha.py trunk/test_suite/unit_tests/_prompt/test_deselect.py trunk/test_suite/unit_tests/_prompt/test_diffusion_tensor.py trunk/test_suite/unit_tests/_prompt/test_eliminate.py trunk/test_suite/unit_tests/_prompt/test_minimisation.py trunk/test_suite/unit_tests/_prompt/test_model_free.py trunk/test_suite/unit_tests/_prompt/test_molecule.py trunk/test_suite/unit_tests/_prompt/test_molmol.py trunk/test_suite/unit_tests/_prompt/test_n_state_model.py trunk/test_suite/unit_tests/_prompt/test_noe.py trunk/test_suite/unit_tests/_prompt/test_pymol.py trunk/test_suite/unit_tests/_prompt/test_relax_data.py trunk/test_suite/unit_tests/_prompt/test_relax_fit.py trunk/test_suite/unit_tests/_prompt/test_residue.py trunk/test_suite/unit_tests/_prompt/test_select.py trunk/test_suite/unit_tests/_prompt/test_sequence.py trunk/test_suite/unit_tests/_prompt/test_spectrum.py trunk/test_suite/unit_tests/_prompt/test_spin.py trunk/test_suite/unit_tests/_prompt/test_state.py trunk/test_suite/unit_tests/_prompt/test_structure.py trunk/test_suite/unit_tests/_prompt/test_uf_objects.py trunk/test_suite/unit_tests/_prompt/test_value.py trunk/test_suite/unit_tests/_scons/__init__.py trunk/test_suite/unit_tests/_specific_fns/__init__.py trunk/test_suite/unit_tests/_specific_fns/_model_free/__init__.py trunk/test_suite/unit_tests/_specific_fns/_model_free/test___init__.py trunk/test_suite/unit_tests/_specific_fns/_model_free/test_main.py trunk/test_suite/unit_tests/_specific_fns/test___init__.py trunk/test_suite/unit_tests/_specific_fns/test_api.py trunk/test_suite/unit_tests/_specific_fns/test_n_state_model.py trunk/test_suite/unit_tests/_user_functions/__init__.py trunk/test_suite/unit_tests/_user_functions/test___init__.py trunk/test_suite/unit_tests/align_tensor_testing_base.py trunk/test_suite/unit_tests/base_classes.py trunk/test_suite/unit_tests/diffusion_tensor_testing_base.py trunk/test_suite/unit_tests/minimisation_testing_base.py trunk/test_suite/unit_tests/model_free_testing_base.py trunk/test_suite/unit_tests/molecule_testing_base.py trunk/test_suite/unit_tests/n_state_model_testing_base.py trunk/test_suite/unit_tests/package_checking.py trunk/test_suite/unit_tests/relax_data_testing_base.py trunk/test_suite/unit_tests/residue_testing_base.py trunk/test_suite/unit_tests/sequence_testing_base.py [... 1569 lines stripped ...]