r17394 - /trunk/docs/latex/jw_mapping.tex -- August 30, 2012 - 11:14

Author: bugman
Date: Thu Aug 30 11:14:21 2012
New Revision: 17394

URL: http://svn.gna.org/viewcvs/relax?rev=17394&view=rev
Log:
Fixes for the referencing in the J(w) mapping chapter of the user manual.


Modified:
    trunk/docs/latex/jw_mapping.tex

Modified: trunk/docs/latex/jw_mapping.tex
URL: 
http://svn.gna.org/viewcvs/relax/trunk/docs/latex/jw_mapping.tex?rev=17394&r1=17393&r2=17394&view=diff
==============================================================================
--- trunk/docs/latex/jw_mapping.tex (original)
+++ trunk/docs/latex/jw_mapping.tex Thu Aug 30 11:14:21 2012
@@ -11,7 +11,7 @@
 
 The reduced spectral density mapping analysis is often performed when the 
system under study is not suitable for model-free analysis, or as a last 
resort if a model-free analysis fails.  The aim is to convert the relaxation 
data into three $J(\omega)$ values for the given field strength.  
Interpretation of this data, although slightly less convoluted than the 
relaxation data, is still plagued by problems related to non-spherical 
diffusion and much care must be taken when making conclusions.  A full 
understanding of the model-free analysis and the effect of diffusion tensor 
anisotropy and rhombicity allows for better interpretation of the raw numbers.
 
-To understand how reduced spectral density mapping is implemented in relax, 
the sample script will be worked through.  This analysis type is not 
implemented in the GUI yet, though it shouldn't be too hard if anyone would 
like to contribute this and have a reference added to Chapter~\ref{ch: cite}, 
the citations chapter.
+To understand how reduced spectral density mapping is implemented in relax, 
the sample script will be worked through.  This analysis type is not 
implemented in the GUI yet, though it shouldn't be too hard if anyone would 
like to contribute this and have a reference added to Chapter~\ref{ch: 
citations}, the citations chapter.
 
 
 % The sample script.
@@ -89,7 +89,7 @@
 pipe.create(pipe\_name=`my\_protein', pipe\_type=`jw')
 \end{exampleenv}
 
-Then, in this example, the $^{15}$N spins are created from one of the NOE 
relaxation data files (Chapter~\ref{}):
+Then, in this example, the $^{15}$N spins are created from one of the NOE 
relaxation data files (Chapter~\ref{ch: NOE}):
 
 \begin{exampleenv}
 sequence.read(file=`noe.600.out', res\_num\_col=1, res\_name\_col=2) \\