Author: bugman
Date: Fri Nov 16 15:02:20 2012
New Revision: 17999
URL: http://svn.gna.org/viewcvs/relax?rev=17999&view=rev
Log:
Merged revisions 17968,17970-17976,17979-17982,17987,17994,17997 via svnmerge
from
svn+ssh://bugman@xxxxxxxxxxx/svn/relax/trunk
........
r17968 | bugman | 2012-11-14 12:23:56 +0100 (Wed, 14 Nov 2012) | 6 lines
Bug fix for the grid_search user function.
The elements of the list of integers can be None to indicate that no grid
search in that dimension
is to be performed.
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r17970 | bugman | 2012-11-14 17:21:07 +0100 (Wed, 14 Nov 2012) | 5 lines
Created the N_state_model.test_data_copying system test for the rdc.copy
and pcs.copy user functions.
These user functions do not exist yet, but this test will be used to
implement them.
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r17971 | bugman | 2012-11-14 17:23:10 +0100 (Wed, 14 Nov 2012) | 5 lines
Reactivated the rdc.copy and pcs.copy user function front-ends.
The backends are missing, so relax is currently broken.
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r17972 | bugman | 2012-11-14 17:34:23 +0100 (Wed, 14 Nov 2012) | 3 lines
Created the RelaxNoAlignError error class for use by rdc.copy and pcs.copy.
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r17973 | bugman | 2012-11-14 17:35:00 +0100 (Wed, 14 Nov 2012) | 3 lines
Fix for the RDC and PCS data copying system test script - the sequence is
now also copied.
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r17974 | bugman | 2012-11-14 18:04:50 +0100 (Wed, 14 Nov 2012) | 3 lines
Created the RelaxAlignError error class for use by the rdc.copy and
pcs.copy user functions.
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r17975 | bugman | 2012-11-14 18:05:52 +0100 (Wed, 14 Nov 2012) | 6 lines
Implemented the rdc.copy and pcs.copy user function backends.
This code is copied from the relax_data.copy user function and has been
tailored to the different
data types.
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r17976 | bugman | 2012-11-14 18:20:07 +0100 (Wed, 14 Nov 2012) | 3 lines
Fixes for the rdc.copy and pcs.copy backends.
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r17979 | bugman | 2012-11-14 19:07:06 +0100 (Wed, 14 Nov 2012) | 5 lines
Modified the RDC and PCS data copying system test script to check
overwriting.
The rdc.copy and pcs.copy user function should support the overwriting of
existent values.
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r17980 | bugman | 2012-11-15 09:17:20 +0100 (Thu, 15 Nov 2012) | 3 lines
The rdc.copy and pcs.copy user functions now support overwriting
pre-existing data.
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r17981 | bugman | 2012-11-15 09:27:09 +0100 (Thu, 15 Nov 2012) | 3 lines
Removed some debugging printouts.
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r17982 | bugman | 2012-11-15 09:27:40 +0100 (Thu, 15 Nov 2012) | 3 lines
The N_state_model.test_data_copying system test now checks the spin RDC and
PCS data.
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r17987 | bugman | 2012-11-16 10:47:35 +0100 (Fri, 16 Nov 2012) | 5 lines
Fix for model elimination in the modsel.py model-free sample script.
The eliminate user function should be applied to each data pipe separately.
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r17994 | bugman | 2012-11-16 12:27:38 +0100 (Fri, 16 Nov 2012) | 5 lines
The model_selection user function is now using relax_io.write_data() for
its printouts.
This allows for clean formatting when data pipes have long names.
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r17997 | bugman | 2012-11-16 14:44:53 +0100 (Fri, 16 Nov 2012) | 3 lines
Fix for the relax_io.write_data() function - it can now handle no data
being sent in.
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Added:
branches/cst/test_suite/system_tests/scripts/n_state_model/data_copying.py
- copied unchanged from r17997,
trunk/test_suite/system_tests/scripts/n_state_model/data_copying.py
Modified:
branches/cst/ (props changed)
branches/cst/generic_fns/model_selection.py
branches/cst/generic_fns/pcs.py
branches/cst/generic_fns/rdc.py
branches/cst/relax_errors.py
branches/cst/relax_io.py
branches/cst/sample_scripts/model_free/modsel.py
branches/cst/test_suite/system_tests/n_state_model.py
branches/cst/user_functions/minimisation.py
branches/cst/user_functions/pcs.py
branches/cst/user_functions/rdc.py
[This mail would be too long, it was shortened to contain the URLs only.]
Modified: branches/cst/generic_fns/model_selection.py
URL:
http://svn.gna.org/viewcvs/relax/branches/cst/generic_fns/model_selection.py?rev=17999&r1=17998&r2=17999&view=diff
Modified: branches/cst/generic_fns/pcs.py
URL:
http://svn.gna.org/viewcvs/relax/branches/cst/generic_fns/pcs.py?rev=17999&r1=17998&r2=17999&view=diff
Modified: branches/cst/generic_fns/rdc.py
URL:
http://svn.gna.org/viewcvs/relax/branches/cst/generic_fns/rdc.py?rev=17999&r1=17998&r2=17999&view=diff
Modified: branches/cst/relax_errors.py
URL:
http://svn.gna.org/viewcvs/relax/branches/cst/relax_errors.py?rev=17999&r1=17998&r2=17999&view=diff
Modified: branches/cst/relax_io.py
URL:
http://svn.gna.org/viewcvs/relax/branches/cst/relax_io.py?rev=17999&r1=17998&r2=17999&view=diff
Modified: branches/cst/sample_scripts/model_free/modsel.py
URL:
http://svn.gna.org/viewcvs/relax/branches/cst/sample_scripts/model_free/modsel.py?rev=17999&r1=17998&r2=17999&view=diff
Modified: branches/cst/test_suite/system_tests/n_state_model.py
URL:
http://svn.gna.org/viewcvs/relax/branches/cst/test_suite/system_tests/n_state_model.py?rev=17999&r1=17998&r2=17999&view=diff
Modified: branches/cst/user_functions/minimisation.py
URL:
http://svn.gna.org/viewcvs/relax/branches/cst/user_functions/minimisation.py?rev=17999&r1=17998&r2=17999&view=diff
Modified: branches/cst/user_functions/pcs.py
URL:
http://svn.gna.org/viewcvs/relax/branches/cst/user_functions/pcs.py?rev=17999&r1=17998&r2=17999&view=diff
Modified: branches/cst/user_functions/rdc.py
URL:
http://svn.gna.org/viewcvs/relax/branches/cst/user_functions/rdc.py?rev=17999&r1=17998&r2=17999&view=diff
r17999 - in /branches/cst: ./ generic_fns/ sample_scripts/model_free/ test_suite/system_tests/ test_suite/system_tests/scrip...