r18628 - /branches/frame_order_testing/test_suite/shared_data/frame_order/displacements/rigid_test.py -- March 05, 2013 - 10:48

Author: bugman
Date: Tue Mar  5 10:48:56 2013
New Revision: 18628

URL: http://svn.gna.org/viewcvs/relax?rev=18628&view=rev
Log:
Fixes for the frame order displacement testing script in the test suite.


Modified:
    
branches/frame_order_testing/test_suite/shared_data/frame_order/displacements/rigid_test.py

Modified: 
branches/frame_order_testing/test_suite/shared_data/frame_order/displacements/rigid_test.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/frame_order_testing/test_suite/shared_data/frame_order/displacements/rigid_test.py?rev=18628&r1=18627&r2=18628&view=diff
==============================================================================
--- 
branches/frame_order_testing/test_suite/shared_data/frame_order/displacements/rigid_test.py
 (original)
+++ 
branches/frame_order_testing/test_suite/shared_data/frame_order/displacements/rigid_test.py
 Tue Mar  5 10:48:56 2013
@@ -23,7 +23,7 @@
 
 This script should be run from the directory where it is found with the 
commands:
 
-$ ../../../../relax full_analysis.py
+$ ../../../../relax rigid_test.py
 """
 
 # Python module imports.
@@ -115,8 +115,8 @@
 # Link the domains to the PDB files.
 frame_order.domain_to_pdb(domain='fixed', pdb='displaced.pdb')
 
-# Allow the average domain to be translated during optimisation.
-frame_order.ave_pos_translate()
+# Set up the mechanics of the displacement to the average domain position.
+frame_order.average_position(pivot='com', translation=True)
 
 # Set the initial pivot point (should make no difference for the rigid 
model).
 pivot = array([0, 0, 0], float64)