mailr19336 - in /branches/relax_disp: specific_analyses/relax_disp.py user_functions/relax_disp.py


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Posted by edward on April 03, 2013 - 19:18:
Author: bugman
Date: Wed Apr  3 19:18:47 2013
New Revision: 19336

URL: http://svn.gna.org/viewcvs/relax?rev=19336&view=rev
Log:
Modified the relax_disp.cpmg_frq user function to match 
relax_disp.spin_lock_field.

Both the front and back ends now use the same logic as the 
relax_disp.spin_lock_field user function
and will allow some sanity to the analysis specific code.


Modified:
    branches/relax_disp/specific_analyses/relax_disp.py
    branches/relax_disp/user_functions/relax_disp.py

Modified: branches/relax_disp/specific_analyses/relax_disp.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/specific_analyses/relax_disp.py?rev=19336&r1=19335&r2=19336&view=diff
==============================================================================
--- branches/relax_disp/specific_analyses/relax_disp.py (original)
+++ branches/relax_disp/specific_analyses/relax_disp.py Wed Apr  3 19:18:47 
2013
@@ -320,39 +320,28 @@
         print("The CPMG delay T for experiment '%s' has been set to %s s." % 
(id, cdp.delayT[id]))
 
 
-    def _cpmg_frq(self, cpmg_frq=None, spectrum_id=None):
+    def _cpmg_frq(self, spectrum_id=None, cpmg_frq=None):
         """Set the CPMG frequency associated with a given spectrum.
 
+        @keyword spectrum_id:   The spectrum identification string.
+        @type spectrum_id:      str
         @keyword cpmg_frq:      The frequency, in Hz, of the CPMG pulse 
train.
         @type cpmg_frq:         float
-        @keyword spectrum_id:   The spectrum identification string.
-        @type spectrum_id:      str
         """
 
         # Test if the spectrum id exists.
         if spectrum_id not in cdp.spectrum_ids:
-            raise RelaxError("The peak heights corresponding to spectrum id 
'%s' have not been loaded." % spectrum_id)
-
-        # Store the CPMG frequency in the class instance.
-        if cpmg_frq != None:
-            self.__cpmg_frq = float(cpmg_frq)
-
-        # The index.
-        index = cdp.spectrum_ids.index(spectrum_id)
+            raise RelaxNoSpectraError(spectrum_id)
 
         # Initialise the global CPMG frequency data structure if needed.
         if not hasattr(cdp, 'cpmg_frqs'):
-            cdp.cpmg_frqs = [None] * len(cdp.spectrum_ids)
-
-        # Index not present in the global CPMG frequency data structure.
-        while 1:
-            if index > len(cdp.cpmg_frqs) - 1:
-                cdp.cpmg_frqs.append(None)
-            else:
-                break
-
-        # Add the frequency at the correct position.
-        cdp.cpmg_frqs[index] = cpmg_frq
+            cdp.cpmg_frqs = {}
+
+        # Add the frequency at the correct position, converting to a float 
if needed.
+        cdp.cpmg_frqs[spectrum_id] = float(cpmg_frq)
+
+        # Printout.
+        print("Setting the '%s' spectrum CPMG frequency %s Hz." % 
(spectrum_id, cdp.cpmg_frqs[spectrum_id]))
 
 
     def _calc_r2eff(self, exp_type='cpmg', id=None, delayT=None, 
int_cpmg=1.0, int_ref=1.0):

Modified: branches/relax_disp/user_functions/relax_disp.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/user_functions/relax_disp.py?rev=19336&r1=19335&r2=19336&view=diff
==============================================================================
--- branches/relax_disp/user_functions/relax_disp.py (original)
+++ branches/relax_disp/user_functions/relax_disp.py Wed Apr  3 19:18:47 2013
@@ -143,17 +143,20 @@
 uf.title = "Set the CPMG frequency associated with a given spectrum."
 uf.title_short = "CPMG frequency setting."
 uf.add_keyarg(
+    name = "spectrum_id",
+    py_type = "str",
+    desc_short = "spectrum ID string",
+    desc = "The spectrum ID string to associate the CPMG frequency to.",
+    wiz_element_type = 'combo',
+    wiz_combo_iter = spectrum.get_ids,
+    wiz_read_only = True
+)
+uf.add_keyarg(
     name = "cpmg_frq",
     py_type = "num",
     desc_short = "CPMG frequency (Hz)",
     desc = "The frequency, in Hz, of the CPMG pulse train.",
     can_be_none = True
-)
-uf.add_keyarg(
-    name = "spectrum_id",
-    py_type = "str",
-    desc_short = "spectrum ID string",
-    desc = "The spectrum ID string."
 )
 # Description.
 uf.desc.append(Desc_container())




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