mailr20368 - /branches/relax_disp/auto_analyses/relax_disp.py


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Posted by edward on July 17, 2013 - 18:20:
Author: bugman
Date: Wed Jul 17 18:20:32 2013
New Revision: 20368

URL: http://svn.gna.org/viewcvs/relax?rev=20368&view=rev
Log:
Updated the dispersion auto-analysis write_results() method for the recent 
model changes.


Modified:
    branches/relax_disp/auto_analyses/relax_disp.py

Modified: branches/relax_disp/auto_analyses/relax_disp.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/auto_analyses/relax_disp.py?rev=20368&r1=20367&r2=20368&view=diff
==============================================================================
--- branches/relax_disp/auto_analyses/relax_disp.py (original)
+++ branches/relax_disp/auto_analyses/relax_disp.py Wed Jul 17 18:20:32 2013
@@ -36,7 +36,7 @@
 from pipe_control.pipes import has_pipe
 from prompt.interpreter import Interpreter
 from specific_analyses.relax_disp.disp_data import loop_frq
-from specific_analyses.relax_disp.variables import CPMG_EXP, FIXED_TIME_EXP, 
MODEL_CR72, MODEL_CR72_FULL, MODEL_DPL94, MODEL_IT99, MODEL_LIST_CPMG, 
MODEL_LIST_R1RHO, MODEL_LM63, MODEL_M61, MODEL_M61B, MODEL_NS_2SITE_3D, 
MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_STAR, MODEL_NS_2SITE_STAR_FULL, 
MODEL_R2EFF, R1RHO_EXP
+from specific_analyses.relax_disp.variables import CPMG_EXP, FIXED_TIME_EXP, 
MODEL_CR72, MODEL_CR72_FULL, MODEL_DPL94, MODEL_IT99, MODEL_LIST_CPMG, 
MODEL_LIST_R1RHO, MODEL_LM63, MODEL_M61, MODEL_M61B, MODEL_NS_2SITE_3D, 
MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_EXPANDED, MODEL_NS_2SITE_STAR, 
MODEL_NS_2SITE_STAR_FULL, MODEL_R2EFF, R1RHO_EXP
 from status import Status; status = Status()
 
 
@@ -296,12 +296,12 @@
             self.interpreter.grace.write(x_data_type='res_num', 
y_data_type='i0', file='i0.agr', dir=path, force=True)
 
         ## The R20 parameter.
-        #if cdp.exp_type in CPMG_EXP and model in [None, MODEL_LM63, 
MODEL_CR72, MODEL_CR72_FULL, MODEL_IT99, MODEL_M61, MODEL_DPL94, MODEL_M61B, 
MODEL_NS_2SITE_STAR, MODEL_NS_2SITE_STAR_FULL]:
+        #if cdp.exp_type in CPMG_EXP and model in [None, MODEL_LM63, 
MODEL_CR72, MODEL_IT99, MODEL_M61, MODEL_DPL94, MODEL_M61B, 
MODEL_NS_2SITE_3D, MODEL_NS_2SITE_STAR, MODEL_NS_2SITE_EXPANDED]:
         #    self.interpreter.value.write(param='r2', file='r20.out', 
dir=path, force=True)
         #    self.interpreter.grace.write(x_data_type='res_num', 
y_data_type='r2', file='r20.agr', dir=path, force=True)
 
         ## The R20A and R20B parameters.
-        #if cdp.exp_type in CPMG_EXP and model in [None, MODEL_CR72, 
MODEL_NS_2SITE_STAR]:
+        #if cdp.exp_type in CPMG_EXP and model in [None, MODEL_CR72_FULL, 
MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_STAR_FULL]:
         #    self.interpreter.value.write(param='r2a', file='r20a.out', 
dir=path, force=True)
         #    self.interpreter.value.write(param='r2b', file='r20b.out', 
dir=path, force=True)
         #    self.interpreter.grace.write(x_data_type='res_num', 
y_data_type='r2a', file='r20a.agr', dir=path, force=True)
@@ -313,7 +313,7 @@
         #    self.interpreter.grace.write(x_data_type='res_num', 
y_data_type='r2', file='r1rho0.agr', dir=path, force=True)
 
         # The pA and pB parameters.
-        if model in [None, MODEL_CR72, MODEL_CR72_FULL, MODEL_M61B, 
MODEL_NS_2SITE_STAR, MODEL_NS_2SITE_STAR_FULL]:
+        if model in [None, MODEL_CR72, MODEL_CR72_FULL, MODEL_M61B, 
MODEL_NS_2SITE_3D, MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_STAR, 
MODEL_NS_2SITE_STAR_FULL, MODEL_NS_2SITE_EXPANDED]:
             self.interpreter.value.write(param='pA', file='pA.out', 
dir=path, force=True)
             self.interpreter.value.write(param='pB', file='pB.out', 
dir=path, force=True)
             self.interpreter.grace.write(x_data_type='res_num', 
y_data_type='pA', file='pA.agr', dir=path, force=True)
@@ -330,12 +330,12 @@
             self.interpreter.grace.write(x_data_type='res_num', 
y_data_type='padw2', file='padw2.agr', dir=path, force=True)
 
         # The dw parameter.
-        if model in [None, MODEL_CR72, MODEL_CR72_FULL, MODEL_M61B, 
MODEL_NS_2SITE_STAR, MODEL_NS_2SITE_STAR_FULL]:
+        if model in [None, MODEL_CR72, MODEL_CR72_FULL, MODEL_M61B, 
MODEL_NS_2SITE_3D, MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_STAR, 
MODEL_NS_2SITE_STAR_FULL, MODEL_NS_2SITE_EXPANDED]:
             self.interpreter.value.write(param='dw', file='dw.out', 
dir=path, force=True)
             self.interpreter.grace.write(x_data_type='res_num', 
y_data_type='dw', file='dw.agr', dir=path, force=True)
 
         # The kex and tex parameters.
-        if model in [None, MODEL_LM63, MODEL_CR72, MODEL_CR72_FULL, 
MODEL_IT99, MODEL_M61, MODEL_DPL94, MODEL_M61B, MODEL_NS_2SITE_STAR, 
MODEL_NS_2SITE_STAR_FULL]:
+        if model in [None, MODEL_LM63, MODEL_CR72, MODEL_CR72_FULL, 
MODEL_IT99, MODEL_M61, MODEL_DPL94, MODEL_M61B, MODEL_NS_2SITE_3D, 
MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_STAR, MODEL_NS_2SITE_STAR_FULL, 
MODEL_NS_2SITE_EXPANDED]:
             self.interpreter.value.write(param='kex', file='kex.out', 
dir=path, force=True)
             self.interpreter.value.write(param='tex', file='tex.out', 
dir=path, force=True)
             self.interpreter.grace.write(x_data_type='res_num', 
y_data_type='kex', file='kex.agr', dir=path, force=True)




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