mailr20628 - /branches/relax_disp/specific_analyses/relax_disp/variables.py


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Posted by edward on August 18, 2013 - 16:01:
Author: bugman
Date: Sun Aug 18 16:01:43 2013
New Revision: 20628

URL: http://svn.gna.org/viewcvs/relax?rev=20628&view=rev
Log:
Added the new 'TSMFK01' model to the 
specific_analyses\relax_disp\variables.py module.

This is the Tollinger/Kay model for the 2-site very-slow exchange model for 
CPMG-type experiments, which cover the range of microsecond to second time 
scale.
Paper by M. Tollinger, N.R. Skrynnikov, F.A.A. Mulder, J.D.F. Kay and L.E. 
Kay (2001).

Progress sr #3071: https://gna.org/support/index.php?3071 - Implementation of 
Tollinger/Kay dispersion model (2001)
Following the guide at: 
http://wiki.nmr-relax.com/Tutorial_for_adding_relaxation_dispersion_models_to_relax

Troels E. Linnet provided this patch. Commit by: tlinnet _aaattt_ 
gmail_dot_com

Signed-off-by: Edward d'Auvergne <edward@xxxxxxxxxxxxx>

Modified:
    branches/relax_disp/specific_analyses/relax_disp/variables.py

Modified: branches/relax_disp/specific_analyses/relax_disp/variables.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/specific_analyses/relax_disp/variables.py?rev=20628&r1=20627&r2=20628&view=diff
==============================================================================
--- branches/relax_disp/specific_analyses/relax_disp/variables.py (original)
+++ branches/relax_disp/specific_analyses/relax_disp/variables.py Sun Aug 18 
16:01:43 2013
@@ -47,6 +47,9 @@
 MODEL_LM63 = 'LM63'
 """The CPMG 2-site fast exchange model of Luz and Meiboom (1963)."""
 
+MODEL_TSMFK01 = 'TSMFK01'
+"""The CPMG 2-site very-slow exchange model, range of microsecond to second 
time scale, of M. Tollinger, N.R. Skrynnikov, F.A.A. Mulder, J.D.F. Kay and 
L.E. Kay (2001)."""
+
 MODEL_LM63_3SITE = 'LM63 3-site'
 """The CPMG 3-site fast exchange model of Luz and Meiboom (1963)."""
 
@@ -90,16 +93,16 @@
 
 
 # The model lists.
-MODEL_LIST_DISP = [MODEL_NOREX, MODEL_LM63, MODEL_LM63_3SITE, MODEL_CR72, 
MODEL_CR72_FULL, MODEL_IT99, MODEL_M61, MODEL_DPL94, MODEL_M61B, MODEL_TP02, 
MODEL_NS_2SITE_3D, MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_STAR, 
MODEL_NS_2SITE_STAR_FULL, MODEL_NS_2SITE_EXPANDED]
+MODEL_LIST_DISP = [MODEL_NOREX, MODEL_LM63, MODEL_TSMFK01, MODEL_LM63_3SITE, 
MODEL_CR72, MODEL_CR72_FULL, MODEL_IT99, MODEL_M61, MODEL_DPL94, MODEL_M61B, 
MODEL_TP02, MODEL_NS_2SITE_3D, MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_STAR, 
MODEL_NS_2SITE_STAR_FULL, MODEL_NS_2SITE_EXPANDED]
 """The list of all dispersion models (excluding the R2eff model)."""
 
-MODEL_LIST_FULL = [MODEL_R2EFF, MODEL_NOREX, MODEL_LM63, MODEL_LM63_3SITE, 
MODEL_CR72, MODEL_CR72_FULL, MODEL_IT99, MODEL_M61, MODEL_DPL94, MODEL_M61B, 
MODEL_TP02, MODEL_NS_2SITE_3D, MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_STAR, 
MODEL_NS_2SITE_STAR_FULL, MODEL_NS_2SITE_EXPANDED]
+MODEL_LIST_FULL = [MODEL_R2EFF, MODEL_NOREX, MODEL_LM63, MODEL_TSMFK01, 
MODEL_LM63_3SITE, MODEL_CR72, MODEL_CR72_FULL, MODEL_IT99, MODEL_M61, 
MODEL_DPL94, MODEL_M61B, MODEL_TP02, MODEL_NS_2SITE_3D, 
MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_STAR, MODEL_NS_2SITE_STAR_FULL, 
MODEL_NS_2SITE_EXPANDED]
 """The list of the R2eff model together with all dispersion models."""
 
-MODEL_LIST_CPMG = [MODEL_NOREX, MODEL_LM63, MODEL_LM63_3SITE, MODEL_CR72, 
MODEL_CR72_FULL, MODEL_IT99, MODEL_NS_2SITE_3D, MODEL_NS_2SITE_3D_FULL, 
MODEL_NS_2SITE_STAR, MODEL_NS_2SITE_STAR_FULL, MODEL_NS_2SITE_EXPANDED]
+MODEL_LIST_CPMG = [MODEL_NOREX, MODEL_LM63, MODEL_TSMFK01, MODEL_LM63_3SITE, 
MODEL_CR72, MODEL_CR72_FULL, MODEL_IT99, MODEL_NS_2SITE_3D, 
MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_STAR, MODEL_NS_2SITE_STAR_FULL, 
MODEL_NS_2SITE_EXPANDED]
 """The list of all dispersion models specifically for CPMG-type experiments 
(excluding the R2eff model)."""
 
-MODEL_LIST_CPMG_FULL = [MODEL_R2EFF, MODEL_NOREX, MODEL_LM63, 
MODEL_LM63_3SITE, MODEL_CR72, MODEL_CR72_FULL, MODEL_IT99, MODEL_NS_2SITE_3D, 
MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_STAR, MODEL_NS_2SITE_STAR_FULL, 
MODEL_NS_2SITE_EXPANDED]
+MODEL_LIST_CPMG_FULL = [MODEL_R2EFF, MODEL_NOREX, MODEL_LM63, MODEL_TSMFK01, 
MODEL_LM63_3SITE, MODEL_CR72, MODEL_CR72_FULL, MODEL_IT99, MODEL_NS_2SITE_3D, 
MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_STAR, MODEL_NS_2SITE_STAR_FULL, 
MODEL_NS_2SITE_EXPANDED]
 """The list of the R2eff model together with all dispersion models 
specifically for CPMG-type experiments."""
 
 MODEL_LIST_R1RHO = [MODEL_NOREX, MODEL_M61, MODEL_DPL94, MODEL_M61B, 
MODEL_TP02]




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