Author: bugman Date: Sun Aug 18 16:01:43 2013 New Revision: 20628 URL: http://svn.gna.org/viewcvs/relax?rev=20628&view=rev Log: Added the new 'TSMFK01' model to the specific_analyses\relax_disp\variables.py module. This is the Tollinger/Kay model for the 2-site very-slow exchange model for CPMG-type experiments, which cover the range of microsecond to second time scale. Paper by M. Tollinger, N.R. Skrynnikov, F.A.A. Mulder, J.D.F. Kay and L.E. Kay (2001). Progress sr #3071: https://gna.org/support/index.php?3071 - Implementation of Tollinger/Kay dispersion model (2001) Following the guide at: http://wiki.nmr-relax.com/Tutorial_for_adding_relaxation_dispersion_models_to_relax Troels E. Linnet provided this patch. Commit by: tlinnet _aaattt_ gmail_dot_com Signed-off-by: Edward d'Auvergne <edward@xxxxxxxxxxxxx> Modified: branches/relax_disp/specific_analyses/relax_disp/variables.py Modified: branches/relax_disp/specific_analyses/relax_disp/variables.py URL: http://svn.gna.org/viewcvs/relax/branches/relax_disp/specific_analyses/relax_disp/variables.py?rev=20628&r1=20627&r2=20628&view=diff ============================================================================== --- branches/relax_disp/specific_analyses/relax_disp/variables.py (original) +++ branches/relax_disp/specific_analyses/relax_disp/variables.py Sun Aug 18 16:01:43 2013 @@ -47,6 +47,9 @@ MODEL_LM63 = 'LM63' """The CPMG 2-site fast exchange model of Luz and Meiboom (1963).""" +MODEL_TSMFK01 = 'TSMFK01' +"""The CPMG 2-site very-slow exchange model, range of microsecond to second time scale, of M. Tollinger, N.R. Skrynnikov, F.A.A. Mulder, J.D.F. Kay and L.E. Kay (2001).""" + MODEL_LM63_3SITE = 'LM63 3-site' """The CPMG 3-site fast exchange model of Luz and Meiboom (1963).""" @@ -90,16 +93,16 @@ # The model lists. -MODEL_LIST_DISP = [MODEL_NOREX, MODEL_LM63, MODEL_LM63_3SITE, MODEL_CR72, MODEL_CR72_FULL, MODEL_IT99, MODEL_M61, MODEL_DPL94, MODEL_M61B, MODEL_TP02, MODEL_NS_2SITE_3D, MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_STAR, MODEL_NS_2SITE_STAR_FULL, MODEL_NS_2SITE_EXPANDED] +MODEL_LIST_DISP = [MODEL_NOREX, MODEL_LM63, MODEL_TSMFK01, MODEL_LM63_3SITE, MODEL_CR72, MODEL_CR72_FULL, MODEL_IT99, MODEL_M61, MODEL_DPL94, MODEL_M61B, MODEL_TP02, MODEL_NS_2SITE_3D, MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_STAR, MODEL_NS_2SITE_STAR_FULL, MODEL_NS_2SITE_EXPANDED] """The list of all dispersion models (excluding the R2eff model).""" -MODEL_LIST_FULL = [MODEL_R2EFF, MODEL_NOREX, MODEL_LM63, MODEL_LM63_3SITE, MODEL_CR72, MODEL_CR72_FULL, MODEL_IT99, MODEL_M61, MODEL_DPL94, MODEL_M61B, MODEL_TP02, MODEL_NS_2SITE_3D, MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_STAR, MODEL_NS_2SITE_STAR_FULL, MODEL_NS_2SITE_EXPANDED] +MODEL_LIST_FULL = [MODEL_R2EFF, MODEL_NOREX, MODEL_LM63, MODEL_TSMFK01, MODEL_LM63_3SITE, MODEL_CR72, MODEL_CR72_FULL, MODEL_IT99, MODEL_M61, MODEL_DPL94, MODEL_M61B, MODEL_TP02, MODEL_NS_2SITE_3D, MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_STAR, MODEL_NS_2SITE_STAR_FULL, MODEL_NS_2SITE_EXPANDED] """The list of the R2eff model together with all dispersion models.""" -MODEL_LIST_CPMG = [MODEL_NOREX, MODEL_LM63, MODEL_LM63_3SITE, MODEL_CR72, MODEL_CR72_FULL, MODEL_IT99, MODEL_NS_2SITE_3D, MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_STAR, MODEL_NS_2SITE_STAR_FULL, MODEL_NS_2SITE_EXPANDED] +MODEL_LIST_CPMG = [MODEL_NOREX, MODEL_LM63, MODEL_TSMFK01, MODEL_LM63_3SITE, MODEL_CR72, MODEL_CR72_FULL, MODEL_IT99, MODEL_NS_2SITE_3D, MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_STAR, MODEL_NS_2SITE_STAR_FULL, MODEL_NS_2SITE_EXPANDED] """The list of all dispersion models specifically for CPMG-type experiments (excluding the R2eff model).""" -MODEL_LIST_CPMG_FULL = [MODEL_R2EFF, MODEL_NOREX, MODEL_LM63, MODEL_LM63_3SITE, MODEL_CR72, MODEL_CR72_FULL, MODEL_IT99, MODEL_NS_2SITE_3D, MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_STAR, MODEL_NS_2SITE_STAR_FULL, MODEL_NS_2SITE_EXPANDED] +MODEL_LIST_CPMG_FULL = [MODEL_R2EFF, MODEL_NOREX, MODEL_LM63, MODEL_TSMFK01, MODEL_LM63_3SITE, MODEL_CR72, MODEL_CR72_FULL, MODEL_IT99, MODEL_NS_2SITE_3D, MODEL_NS_2SITE_3D_FULL, MODEL_NS_2SITE_STAR, MODEL_NS_2SITE_STAR_FULL, MODEL_NS_2SITE_EXPANDED] """The list of the R2eff model together with all dispersion models specifically for CPMG-type experiments.""" MODEL_LIST_R1RHO = [MODEL_NOREX, MODEL_M61, MODEL_DPL94, MODEL_M61B, MODEL_TP02]