Author: bugman
Date: Thu Oct 17 17:52:07 2013
New Revision: 21166
URL: http://svn.gna.org/viewcvs/relax?rev=21166&view=rev
Log:
Updated the HTML user manual to relax version 3.0.1.
This is for http://www.nmr-relax.com/manual/index.html.
Added:
website/manual/align_tensor.png (with props)
website/manual/application-x-desktop.png (with props)
website/manual/applications-education.png (with props)
website/manual/archive-extract.png (with props)
website/manual/bmrb.png (with props)
website/manual/bruker.png (with props)
website/manual/chemical_shift.png (with props)
website/manual/chemical_shift_read.html
website/manual/chronometer.png (with props)
website/manual/consistency_testing.png (with props)
website/manual/dialog-cancel.png (with props)
website/manual/dialog-close.png (with props)
website/manual/dialog-ok.png (with props)
website/manual/diff_tensor.png (with props)
website/manual/dipole_pair.png (with props)
website/manual/discrepancy_curve.png (with props)
website/manual/document-edit.png (with props)
website/manual/document-open.png (with props)
website/manual/document-preview.png (with props)
website/manual/document-save.png (with props)
website/manual/documentation.png (with props)
website/manual/edit-delete.png (with props)
website/manual/edit-rename.png (with props)
website/manual/edit-select.png (with props)
website/manual/fid.png (with props)
website/manual/frame_order.png (with props)
website/manual/frq.png (with props)
website/manual/grace_icon.png (with props)
website/manual/grid_search.png (with props)
website/manual/help-about.png (with props)
website/manual/j_coupling.png (with props)
website/manual/jw_mapping.png (with props)
website/manual/list-add-relax-blue.png (with props)
website/manual/list-add.png (with props)
website/manual/list-remove.png (with props)
website/manual/minimise.png (with props)
website/manual/model-free.png (with props)
website/manual/modelfree4.png (with props)
website/manual/molecule.png (with props)
website/manual/molmol.png (with props)
website/manual/n_state_model.png (with props)
website/manual/noe.png (with props)
website/manual/nuclear_symbol.png (with props)
website/manual/object-locked.png (with props)
website/manual/opendx.png (with props)
website/manual/pipe.png (with props)
website/manual/pipe_bundle.png (with props)
website/manual/pipe_hybrid.png (with props)
website/manual/pymol_icon.png (with props)
website/manual/relax.png (with props)
website/manual/relax_fit.png (with props)
website/manual/residue.png (with props)
website/manual/roll-relax-blue.png (with props)
website/manual/sequence.png (with props)
website/manual/spectrometer.png (with props)
website/manual/spin.png (with props)
website/manual/spin_grey.png (with props)
website/manual/structure.png (with props)
website/manual/system-switch-user.png (with props)
website/manual/utilities-terminal.png (with props)
website/manual/value.png (with props)
Removed:
website/manual/img418.png
website/manual/img419.png
website/manual/img420.png
website/manual/img421.png
website/manual/img422.png
website/manual/img423.png
website/manual/img424.png
website/manual/img425.png
website/manual/img426.png
website/manual/img427.png
website/manual/img428.png
website/manual/img429.png
website/manual/img430.png
website/manual/img431.png
website/manual/img432.png
website/manual/img433.png
website/manual/img434.png
website/manual/img435.png
website/manual/img436.png
website/manual/img437.png
website/manual/img438.png
website/manual/img439.png
website/manual/img440.png
website/manual/img441.png
website/manual/img442.png
website/manual/img443.png
website/manual/img444.png
website/manual/img445.png
website/manual/img446.png
website/manual/img447.png
website/manual/img448.png
website/manual/img449.png
website/manual/img450.png
website/manual/img451.png
website/manual/img452.png
website/manual/img453.png
website/manual/img454.png
website/manual/img455.png
website/manual/img456.png
website/manual/img457.png
website/manual/img458.png
website/manual/img459.png
website/manual/img460.png
website/manual/img461.png
website/manual/img462.png
website/manual/img463.png
website/manual/img464.png
website/manual/img465.png
website/manual/img466.png
website/manual/img467.png
website/manual/img468.png
website/manual/img469.png
website/manual/img470.png
website/manual/img471.png
website/manual/img472.png
website/manual/img473.png
website/manual/img474.png
website/manual/img475.png
website/manual/img476.png
website/manual/img477.png
website/manual/peak_intensity3.png
website/manual/peak_intensity_trp_peaks.png
Modified:
website/manual/Abbreviations.html
website/manual/About_this_document.html
website/manual/Access_internals_relax.html
website/manual/Advanced_topics.html
website/manual/All_model_free_models_script_mode_explanation.html
website/manual/All_model_free_models_script_mode_sample_script.html
website/manual/Alphabetical_listing_user_functions.html
website/manual/Assigning_issue_yourself.html
website/manual/Becoming_committer.html
website/manual/Bibliography.html
website/manual/Branch_creation.html
website/manual/Branches.html
website/manual/Brownian_rotational_diffusion.html
website/manual/C_module_compilation.html
website/manual/Calculating_NOE.html
website/manual/Calculation_NOE_in_prompt_script_UI_mode.html
website/manual/Cleaning_up.html
website/manual/Closing_issue.html
website/manual/Coding_conventions.html
website/manual/Comments.html
website/manual/Committers.html
website/manual/Compilation_API_documentation_HTML_version.html
website/manual/Compilation_user_manual_HTML_version.html
website/manual/Compilation_user_manual_PDF_version.html
website/manual/Components_Ri_prime_theta_equations.html
website/manual/Conjugate_gradient_methods.html
website/manual/Consistency_testing.html
website/manual/Consistency_testing_analysis_references.html
website/manual/Consistency_testing_in_prompt_script_UI_mode.html
website/manual/Consistency_testing_script_mode_calculation_error_propagation.html
website/manual/Consistency_testing_script_mode_data_pipe_spin.html
website/manual/Consistency_testing_script_mode_relaxation_data_loading.html
website/manual/Consistency_testing_script_mode_relaxation_interactions.html
website/manual/Consistency_testing_script_mode_sample_script.html
website/manual/Consistency_testing_script_mode_visualisation_data_output.html
website/manual/Constraint_algorithms.html
website/manual/Construction_Hessian.html
website/manual/Construction_gradient.html
website/manual/Construction_values_gradients_Hessians.html
website/manual/Contents.html
website/manual/Copying_modification_sublicencing_distribution_relax.html
website/manual/Dasha.html
website/manual/Data_analysis_tools.html
website/manual/Data_visualisation.html
website/manual/Defaults.html
website/manual/Dependencies.html
website/manual/Diagonal_scaling.html
website/manual/Discussing_major_changes.html
website/manual/Doc_strings.html
website/manual/Docstring_sectioning.html
website/manual/Ellipsoidal_diffusion_tensor.html
website/manual/Ellipsoidal_dot_product_derivatives.html
website/manual/Final_checks_curve_fitting.html
website/manual/Format_commit_logs.html
website/manual/From_spectra_peak_intensities_NOE.html
website/manual/From_spectra_peak_intensities_relaxation_rates.html
website/manual/Further_details.html
website/manual/GPL.html
website/manual/GUI.html
website/manual/GUI_mode_deselect_spins.html
website/manual/GUI_mode_manual_construction.html
website/manual/GUI_mode_setting_up_data_pipe.html
website/manual/GUI_mode_spins_from_sequence_file.html
website/manual/GUI_mode_spins_from_structural_data.html
website/manual/Generic_parts_relax.html
website/manual/Grace.html
website/manual/Graphical_user_interface_reference.html
website/manual/Hessian.html
website/manual/Hessian_modifications.html
website/manual/How_use_relax.html
website/manual/Implementation.html
website/manual/Indentation.html
website/manual/Index.html
website/manual/Installation.html
website/manual/Installation_instructions.html
website/manual/Installation_on_GNU_Linux.html
website/manual/Installation_on_MS_Windows.html
website/manual/Installation_on_Mac_OS_X.html
website/manual/Installation_on_your_OS.html
website/manual/Interatomic_data_containers.html
website/manual/Interfacing_with_other_programs.html
website/manual/Introduction.html
website/manual/Introduction_consistency_testing_relaxation_data.html
website/manual/Introduction_mathematics_behind_optimisation_relaxation_data.html
website/manual/Introduction_multi_processor.html
website/manual/Introduction_reduced_spectral_density_mapping.html
website/manual/Introduction_relaxation_curve_fitting.html
website/manual/Introduction_steady_state_NOE.html
website/manual/J_w_mapping_script_mode_calculation_error_propagation.html
website/manual/J_w_mapping_script_mode_data_pipe_spin.html
website/manual/J_w_mapping_script_mode_relaxation_data_loading.html
website/manual/J_w_mapping_script_mode_relaxation_interactions.html
website/manual/J_w_mapping_script_mode_sample_script.html
website/manual/J_w_mapping_script_mode_visualisation_data_output.html
website/manual/Joining_Gna.html
website/manual/Joining_relax_project.html
website/manual/Keeping_branch_up_date_using_svnmerge_py.html
website/manual/Latest_sources_relax_repositories.html
website/manual/Licence.html
website/manual/Line_search_methods.html
website/manual/Links_links_more_links.html
website/manual/List_Figures.html
website/manual/List_Tables.html
website/manual/Literature.html
website/manual/Logarithmic_barrier_constraint_algorithm.html
website/manual/Making_distribution_archives.html
website/manual/Measuring_peak_intensities.html
website/manual/Merging_branch_back_into_main_line.html
website/manual/Method_Multipliers_algorithm.html
website/manual/Model_free_analysis.html
website/manual/Model_free_analysis_in_reverse.html
website/manual/Model_free_analysis_references.html
website/manual/Model_free_model_selection.html
website/manual/Model_free_model_selection_script_mode_explanation.html
website/manual/Model_free_model_selection_script_mode_sample_script.html
website/manual/Model_free_optimisation_theory.html
website/manual/Model_free_theory.html
website/manual/Model_selection_references.html
website/manual/Modelfree4.html
website/manual/Modification_latest_sources_creating_patches_with_Subversion.html
website/manual/Modification_official_releases_creating_patches_with_diff.html
website/manual/Molecule_residue_spin_containers.html
website/manual/Molmol.html
website/manual/NOE_GUI_mode_NOE_calculation.html
website/manual/NOE_GUI_mode_general_setup.html
website/manual/NOE_GUI_mode_initialisation_data_pipe.html
website/manual/NOE_GUI_mode_loading_data.html
website/manual/NOE_GUI_mode_setting_up_spin_systems.html
website/manual/NOE_GUI_mode_unresolved_spins.html
website/manual/NOE_auto_analysis_in_GUI.html
website/manual/NOE_script_mode_NOE_calculation.html
website/manual/NOE_script_mode_initialisation_data_pipe.html
website/manual/NOE_script_mode_loading_data.html
website/manual/NOE_script_mode_sample_script.html
website/manual/NOE_script_mode_setting_errors.html
website/manual/NOE_script_mode_setting_up_spin_systems.html
website/manual/NOE_script_mode_unresolved_spins.html
website/manual/NOE_script_mode_viewing_results.html
website/manual/N_state_model_analysis_references.html
website/manual/Navigation.html
website/manual/News.html
website/manual/OpenDX.html
website/manual/Open_source_infrastructure.html
website/manual/Optimisation.html
website/manual/Optimisation_algorithms.html
website/manual/Optimisation_all_model_free_models.html
website/manual/Optimisation_diffusion_tensor_parameters.html
website/manual/Optimisation_global_model.html
website/manual/Optimisation_local_taum_models.html
website/manual/Optimisation_model_free_models.html
website/manual/Optimisation_relaxation_data_values_gradients_Hessians.html
website/manual/Optimisation_single_model_free_model.html
website/manual/Optional_programs.html
website/manual/Other_citations.html
website/manual/Other_methods.html
website/manual/Power_users.html
website/manual/Preface_citing_relax.html
website/manual/Private_vs_public_messages.html
website/manual/Program_features.html
website/manual/PyMOL.html
website/manual/Python.html
website/manual/Reduced_spectral_density_mapping.html
website/manual/Reduced_spectral_density_mapping_references.html
website/manual/Reference.html
website/manual/Relax_fit_GUI_mode_general_setup.html
website/manual/Relax_fit_GUI_mode_initialisation_data_pipe.html
website/manual/Relax_fit_GUI_mode_loading_data.html
website/manual/Relax_fit_GUI_mode_optimisation_error_analysis.html
website/manual/Relax_fit_GUI_mode_setting_up_spin_systems.html
website/manual/Relax_fit_GUI_mode_unresolved_spins.html
website/manual/Relax_fit_script_mode_error_analysis.html
website/manual/Relax_fit_script_mode_finishing_off.html
website/manual/Relax_fit_script_mode_initialisation_data_pipe.html
website/manual/Relax_fit_script_mode_loading_data.html
website/manual/Relax_fit_script_mode_optimisation_exponential_curves.html
website/manual/Relax_fit_script_mode_rest_setup.html
website/manual/Relax_fit_script_mode_sample_script.html
website/manual/Relax_fit_script_mode_setting_up_spin_systems.html
website/manual/Relaxation_curve_fitting.html
website/manual/Relaxation_curve_fitting_in_prompt_script_UI_mode.html
website/manual/Replying_message.html
website/manual/Reporting_bugs.html
website/manual/Ri_prime_theta_Hessians.html
website/manual/Ri_prime_theta_gradients.html
website/manual/Ri_prime_theta_values.html
website/manual/Ri_prime_theta_values_gradients_Hessians.html
website/manual/Ri_theta_Hessians.html
website/manual/Ri_theta_gradients.html
website/manual/Ri_theta_values.html
website/manual/Ri_theta_values_gradients_Hessians.html
website/manual/Running_non_compiled_version.html
website/manual/SCons_build_system.html
website/manual/SCons_help.html
website/manual/Script_mode_manual_construction.html
website/manual/Script_mode_spins_from_sequence_file.html
website/manual/Script_mode_spins_from_structural_data.html
website/manual/Scripting.html
website/manual/Search_engine_indexing.html
website/manual/Setup_in_GUI.html
website/manual/Setup_in_prompt_script_UI.html
website/manual/Single_model_free_model_script_mode_explanation.html
website/manual/Single_model_free_model_script_mode_sample_script.html
website/manual/Specific_analyses.html
website/manual/Spectral_processing.html
website/manual/Spherical_diffusion_tensor.html
website/manual/Spheroidal_diffusion_tensor.html
website/manual/Spheroidal_dot_product_derivatives.html
website/manual/Submitting_bug_report.html
website/manual/Submitting_changes_as_patch.html
website/manual/Submitting_changes_relax_project.html
website/manual/Supported_NMR_theories.html
website/manual/Tab_completion.html
website/manual/Temperature_control_calibration.html
website/manual/Topology_space.html
website/manual/Trust_region_methods.html
website/manual/Usage_multi_processor.html
website/manual/Usage_name_relax.html
website/manual/User_functions.html
website/manual/Variable_function_class_names.html
website/manual/Version_control_using_Subversion.html
website/manual/Whitespace.html
website/manual/align_tensor_copy.html
website/manual/align_tensor_delete.html
website/manual/align_tensor_display.html
website/manual/align_tensor_fix.html
website/manual/align_tensor_init.html
website/manual/align_tensor_matrix_angles.html
website/manual/align_tensor_reduction.html
website/manual/align_tensor_set_domain.html
website/manual/align_tensor_svd.html
website/manual/angles_diff_frame.html
website/manual/basics.html
website/manual/bmrb_citation.html
website/manual/bmrb_display.html
website/manual/bmrb_read.html
website/manual/bmrb_script.html
website/manual/bmrb_software.html
website/manual/bmrb_software_select.html
website/manual/bmrb_thiol_state.html
website/manual/bmrb_write.html
website/manual/bruker_read.html
website/manual/bug_task_support_request_trackers.html
website/manual/calc.html
website/manual/chi_squared_Hessian.html
website/manual/chi_squared_function_chi2_theta.html
website/manual/chi_squared_gradient.html
website/manual/chi_squared_value.html
website/manual/chi_squared_value_gradient_Hessian.html
website/manual/concept_relax_data_model.html
website/manual/consistency_tests_set_frq.html
website/manual/core_design_relax.html
website/manual/correlation_time_Hessian_sphere.html
website/manual/correlation_time_Hessians_ellipsoid.html
website/manual/correlation_time_Hessians_spheroid.html
website/manual/correlation_time_gradient_sphere.html
website/manual/correlation_time_gradients_ellipsoid.html
website/manual/correlation_time_gradients_spheroid.html
website/manual/correlation_time_sphere.html
website/manual/correlation_times_ellipsoid.html
website/manual/correlation_times_spheroid.html
website/manual/d_Auvergne_protocol_GUI_mode_BMRB_deposition.html
website/manual/d_Auvergne_protocol_GUI_mode_completion.html
website/manual/d_Auvergne_protocol_GUI_mode_data_pipe_initialisation.html
website/manual/d_Auvergne_protocol_GUI_mode_execution.html
website/manual/d_Auvergne_protocol_GUI_mode_general_setup.html
website/manual/d_Auvergne_protocol_GUI_mode_loading_data.html
website/manual/d_Auvergne_protocol_GUI_mode_relaxation_interactions.html
website/manual/d_Auvergne_protocol_GUI_mode_rest_setup.html
website/manual/d_Auvergne_protocol_GUI_mode_setting_up_spin.html
website/manual/d_Auvergne_protocol_GUI_mode_spin_isotopes.html
website/manual/d_Auvergne_protocol_GUI_mode_unresolved_spins.html
website/manual/d_Auvergne_protocol_script_mode_analysis_variables.html
website/manual/d_Auvergne_protocol_script_mode_data_pipe_initialisation.html
website/manual/d_Auvergne_protocol_script_mode_deselection.html
website/manual/d_Auvergne_protocol_script_mode_execution.html
website/manual/d_Auvergne_protocol_script_mode_loading_data.html
website/manual/d_Auvergne_protocol_script_mode_relaxation_interactions.html
website/manual/d_Auvergne_protocol_script_mode_sample_script.html
website/manual/d_Auvergne_protocol_script_mode_setting_up_spin.html
website/manual/dasha_create.html
website/manual/dasha_execute.html
website/manual/dasha_extract.html
website/manual/data_model.html
website/manual/data_pipe.html
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r21166 - /website/manual/