r21285 - in /branches/relax_disp/sample_scripts/relax_disp: R1rho_analysis.py cpmg_analysis.py -- October 28, 2013 - 16:11

Author: bugman
Date: Mon Oct 28 16:11:08 2013
New Revision: 21285

URL: http://svn.gna.org/viewcvs/relax?rev=21285&view=rev
Log:
Created an INSIGNIFICANCE variable for the relaxation dispersion sample 
scripts.

This is to allow the user to eliminate insignificant models.


Modified:
    branches/relax_disp/sample_scripts/relax_disp/R1rho_analysis.py
    branches/relax_disp/sample_scripts/relax_disp/cpmg_analysis.py

Modified: branches/relax_disp/sample_scripts/relax_disp/R1rho_analysis.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/sample_scripts/relax_disp/R1rho_analysis.py?rev=21285&r1=21284&r2=21285&view=diff
==============================================================================
--- branches/relax_disp/sample_scripts/relax_disp/R1rho_analysis.py (original)
+++ branches/relax_disp/sample_scripts/relax_disp/R1rho_analysis.py Mon Oct 
28 16:11:08 2013
@@ -41,11 +41,18 @@
 # The number of Monte Carlo simulations to be used for error analysis at the 
end of the analysis.
 MC_NUM = 500
 
+# The results directory.
+RESULTS_DIR = '.'
+
 # The model selection technique to use.
 MODSEL = 'AIC'
 
 # The flag for only using numeric models in the final model selection.
 NUMERIC_ONLY = False
+
+# The R1rho value in rad/s by which to judge insignificance.  If the maximum 
difference between two points on all dispersion curves for a spin is less 
than this value, that spin will be deselected.
+INSIGNIFICANCE = 1.0
+
 
 
 # Set up the data pipe.
@@ -137,4 +144,4 @@
 ##########################
 
 # Do not change!
-Relax_disp(pipe_name=pipe_name, pipe_bundle=pipe_bundle, models=MODELS, 
grid_inc=GRID_INC, mc_sim_num=MC_NUM, modsel=MODSEL, 
numeric_only=NUMERIC_ONLY)
+Relax_disp(pipe_name=pipe_name, pipe_bundle=pipe_bundle, 
results_dir=RESULTS_DIR, models=MODELS, grid_inc=GRID_INC, mc_sim_num=MC_NUM, 
modsel=MODSEL, insignificance=INSIGNIFICANCE, numeric_only=NUMERIC_ONLY)

Modified: branches/relax_disp/sample_scripts/relax_disp/cpmg_analysis.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/sample_scripts/relax_disp/cpmg_analysis.py?rev=21285&r1=21284&r2=21285&view=diff
==============================================================================
--- branches/relax_disp/sample_scripts/relax_disp/cpmg_analysis.py (original)
+++ branches/relax_disp/sample_scripts/relax_disp/cpmg_analysis.py Mon Oct 28 
16:11:08 2013
@@ -41,11 +41,18 @@
 # The number of Monte Carlo simulations to be used for error analysis at the 
end of the analysis.
 MC_NUM = 500
 
+# The results directory.
+RESULTS_DIR = '.'
+
 # The model selection technique to use.
 MODSEL = 'AIC'
 
 # The flag for only using numeric models in the final model selection.
 NUMERIC_ONLY = False
+
+# The R2eff value in rad/s by which to judge insignificance.  If the maximum 
difference between two points on all dispersion curves for a spin is less 
than this value, that spin will be deselected.
+INSIGNIFICANCE = 1.0
+
 
 
 # Set up the data pipe.
@@ -144,4 +151,4 @@
 ##########################
 
 # Do not change!
-Relax_disp(pipe_name=pipe_name, pipe_bundle=pipe_bundle, models=MODELS, 
grid_inc=GRID_INC, mc_sim_num=MC_NUM, modsel=MODSEL, 
numeric_only=NUMERIC_ONLY)
+Relax_disp(pipe_name=pipe_name, pipe_bundle=pipe_bundle, 
results_dir=RESULTS_DIR, models=MODELS, grid_inc=GRID_INC, mc_sim_num=MC_NUM, 
modsel=MODSEL, insignificance=INSIGNIFICANCE, numeric_only=NUMERIC_ONLY)