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Posted by edward on November 18, 2013 - 20:55:
Author: bugman
Date: Mon Nov 18 20:55:48 2013
New Revision: 21505

URL: http://svn.gna.org/viewcvs/relax?rev=21505&view=rev
Log:
Change of the base relaxation dispersion experiment types.

The base CPMG-type experiment has been changed from "CPMG" to "SQ CPMG".  
This is for better
combined proton-heteronuclear SQ, ZQ, DQ, and MQ (MMQ) data support.  The 
relax_disp.exp_type user
function now also as the proton SQ and MQ CPMG-types available to select from 
rather than the
previous behaviour of relax automatically determining the type from the spin 
type.

All of the CPMG experiment type variables in 
specific_analyses.relax_disp.variables have been
renamed for better ordering.  Many changes were therefore required.


Modified:
    branches/relax_disp/docs/latex/dispersion.tex
    branches/relax_disp/sample_scripts/relax_disp/cpmg_analysis.py
    branches/relax_disp/specific_analyses/relax_disp/api.py
    branches/relax_disp/specific_analyses/relax_disp/catia.py
    branches/relax_disp/specific_analyses/relax_disp/disp_data.py
    branches/relax_disp/specific_analyses/relax_disp/variables.py
    branches/relax_disp/target_functions/relax_disp.py
    branches/relax_disp/test_suite/gui_tests/relax_disp.py
    branches/relax_disp/test_suite/shared_data/dispersion/Hansen/base_pipe.bz2
    
branches/relax_disp/test_suite/shared_data/dispersion/Hansen/generate_r2eff_files.py
    
branches/relax_disp/test_suite/shared_data/dispersion/Hansen/multi_processor/cluster_analysis.py
    
branches/relax_disp/test_suite/shared_data/dispersion/Hansen/multi_processor/precluster.py
    
branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_calc.log
    branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_calc.py
    
branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_pipe.bz2
    
branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_values.bz2
    branches/relax_disp/test_suite/shared_data/dispersion/Hansen/relax_disp.py
    
branches/relax_disp/test_suite/shared_data/dispersion/Hansen/relax_disp_trunc.py
    
branches/relax_disp/test_suite/shared_data/dispersion/KTeilum_FMPoulsen_MAkke_2006/acbp_cpmg_disp_048MGuHCl_40C_041223/ini_setup_trunc.bz2
    
branches/relax_disp/test_suite/shared_data/dispersion/KTeilum_FMPoulsen_MAkke_2006/acbp_cpmg_disp_048MGuHCl_40C_041223/r2eff_pipe_trunc.bz2
    
branches/relax_disp/test_suite/shared_data/dispersion/KTeilum_FMPoulsen_MAkke_2006/acbp_cpmg_disp_048MGuHCl_40C_041223/relax_3_spectra_settings.py
    
branches/relax_disp/test_suite/shared_data/dispersion/KTeilum_FMPoulsen_MAkke_2006/acbp_cpmg_disp_101MGuHCl_40C_041223/ini_setup_trunc.bz2
    
branches/relax_disp/test_suite/shared_data/dispersion/KTeilum_FMPoulsen_MAkke_2006/acbp_cpmg_disp_101MGuHCl_40C_041223/r2eff_pipe_trunc.bz2
    
branches/relax_disp/test_suite/shared_data/dispersion/KTeilum_FMPoulsen_MAkke_2006/acbp_cpmg_disp_101MGuHCl_40C_041223/relax_3_spectra_settings.py
    
branches/relax_disp/test_suite/shared_data/dispersion/Korzhnev_et_al_2005/relax_results/optimise_sq.py
    
branches/relax_disp/test_suite/shared_data/dispersion/Korzhnev_et_al_2005/relax_results/relax_state_sq.py
    
branches/relax_disp/test_suite/shared_data/dispersion/lm63_3site/r2eff_calc.py
    
branches/relax_disp/test_suite/shared_data/dispersion/lm63_3site/relax_results/relax_disp.py
    branches/relax_disp/test_suite/system_tests/relax_disp.py
    
branches/relax_disp/test_suite/system_tests/scripts/relax_disp/hansen_r2eff_data.py
    
branches/relax_disp/test_suite/system_tests/scripts/relax_disp/r2eff_calc.py
    branches/relax_disp/user_functions/relax_disp.py

[This mail would be too long, it was shortened to contain the URLs only.]

Modified: branches/relax_disp/docs/latex/dispersion.tex
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/docs/latex/dispersion.tex?rev=21505&r1=21504&r2=21505&view=diff

Modified: branches/relax_disp/sample_scripts/relax_disp/cpmg_analysis.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/sample_scripts/relax_disp/cpmg_analysis.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: branches/relax_disp/specific_analyses/relax_disp/api.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/specific_analyses/relax_disp/api.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: branches/relax_disp/specific_analyses/relax_disp/catia.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/specific_analyses/relax_disp/catia.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: branches/relax_disp/specific_analyses/relax_disp/disp_data.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/specific_analyses/relax_disp/disp_data.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: branches/relax_disp/specific_analyses/relax_disp/variables.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/specific_analyses/relax_disp/variables.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: branches/relax_disp/target_functions/relax_disp.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/target_functions/relax_disp.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: branches/relax_disp/test_suite/gui_tests/relax_disp.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/gui_tests/relax_disp.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/shared_data/dispersion/Hansen/base_pipe.bz2
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/shared_data/dispersion/Hansen/base_pipe.bz2?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/shared_data/dispersion/Hansen/generate_r2eff_files.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/shared_data/dispersion/Hansen/generate_r2eff_files.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/shared_data/dispersion/Hansen/multi_processor/cluster_analysis.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/shared_data/dispersion/Hansen/multi_processor/cluster_analysis.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/shared_data/dispersion/Hansen/multi_processor/precluster.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/shared_data/dispersion/Hansen/multi_processor/precluster.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_calc.log
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_calc.log?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_calc.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_calc.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_pipe.bz2
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_pipe.bz2?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_values.bz2
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/shared_data/dispersion/Hansen/r2eff_values.bz2?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/shared_data/dispersion/Hansen/relax_disp.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/shared_data/dispersion/Hansen/relax_disp.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/shared_data/dispersion/Hansen/relax_disp_trunc.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/shared_data/dispersion/Hansen/relax_disp_trunc.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/shared_data/dispersion/KTeilum_FMPoulsen_MAkke_2006/acbp_cpmg_disp_048MGuHCl_40C_041223/ini_setup_trunc.bz2
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/shared_data/dispersion/KTeilum_FMPoulsen_MAkke_2006/acbp_cpmg_disp_048MGuHCl_40C_041223/ini_setup_trunc.bz2?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/shared_data/dispersion/KTeilum_FMPoulsen_MAkke_2006/acbp_cpmg_disp_048MGuHCl_40C_041223/r2eff_pipe_trunc.bz2
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/shared_data/dispersion/KTeilum_FMPoulsen_MAkke_2006/acbp_cpmg_disp_048MGuHCl_40C_041223/r2eff_pipe_trunc.bz2?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/shared_data/dispersion/KTeilum_FMPoulsen_MAkke_2006/acbp_cpmg_disp_048MGuHCl_40C_041223/relax_3_spectra_settings.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/shared_data/dispersion/KTeilum_FMPoulsen_MAkke_2006/acbp_cpmg_disp_048MGuHCl_40C_041223/relax_3_spectra_settings.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/shared_data/dispersion/KTeilum_FMPoulsen_MAkke_2006/acbp_cpmg_disp_101MGuHCl_40C_041223/ini_setup_trunc.bz2
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/shared_data/dispersion/KTeilum_FMPoulsen_MAkke_2006/acbp_cpmg_disp_101MGuHCl_40C_041223/ini_setup_trunc.bz2?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/shared_data/dispersion/KTeilum_FMPoulsen_MAkke_2006/acbp_cpmg_disp_101MGuHCl_40C_041223/r2eff_pipe_trunc.bz2
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/shared_data/dispersion/KTeilum_FMPoulsen_MAkke_2006/acbp_cpmg_disp_101MGuHCl_40C_041223/r2eff_pipe_trunc.bz2?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/shared_data/dispersion/KTeilum_FMPoulsen_MAkke_2006/acbp_cpmg_disp_101MGuHCl_40C_041223/relax_3_spectra_settings.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/shared_data/dispersion/KTeilum_FMPoulsen_MAkke_2006/acbp_cpmg_disp_101MGuHCl_40C_041223/relax_3_spectra_settings.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/shared_data/dispersion/Korzhnev_et_al_2005/relax_results/optimise_sq.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/shared_data/dispersion/Korzhnev_et_al_2005/relax_results/optimise_sq.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/shared_data/dispersion/Korzhnev_et_al_2005/relax_results/relax_state_sq.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/shared_data/dispersion/Korzhnev_et_al_2005/relax_results/relax_state_sq.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/shared_data/dispersion/lm63_3site/r2eff_calc.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/shared_data/dispersion/lm63_3site/r2eff_calc.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/shared_data/dispersion/lm63_3site/relax_results/relax_disp.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/shared_data/dispersion/lm63_3site/relax_results/relax_disp.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: branches/relax_disp/test_suite/system_tests/relax_disp.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/system_tests/relax_disp.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/system_tests/scripts/relax_disp/hansen_r2eff_data.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/system_tests/scripts/relax_disp/hansen_r2eff_data.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: 
branches/relax_disp/test_suite/system_tests/scripts/relax_disp/r2eff_calc.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/test_suite/system_tests/scripts/relax_disp/r2eff_calc.py?rev=21505&r1=21504&r2=21505&view=diff

Modified: branches/relax_disp/user_functions/relax_disp.py
URL: 
http://svn.gna.org/viewcvs/relax/branches/relax_disp/user_functions/relax_disp.py?rev=21505&r1=21504&r2=21505&view=diff

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