r21708 - in /trunk/sample_scripts/relax_disp: R1rho_analysis.py cpmg_analysis.py -- November 29, 2013 - 11:11

Author: bugman
Date: Fri Nov 29 11:11:40 2013
New Revision: 21708

URL: http://svn.gna.org/viewcvs/relax?rev=21708&view=rev
Log:
All of the relaxation dispersion auto-analysis options are now exposed by the 
sample scripts.

This included the pre_run_dir argument for specifying a directory of results 
from a non-clustered
analysis and the flag for running MC simulations for all models.


Modified:
    trunk/sample_scripts/relax_disp/R1rho_analysis.py
    trunk/sample_scripts/relax_disp/cpmg_analysis.py

Modified: trunk/sample_scripts/relax_disp/R1rho_analysis.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/sample_scripts/relax_disp/R1rho_analysis.py?rev=21708&r1=21707&r2=21708&view=diff
==============================================================================
--- trunk/sample_scripts/relax_disp/R1rho_analysis.py (original)
+++ trunk/sample_scripts/relax_disp/R1rho_analysis.py Fri Nov 29 11:11:40 2013
@@ -41,8 +41,14 @@
 # The number of Monte Carlo simulations to be used for error analysis at the 
end of the analysis.
 MC_NUM = 500
 
+# A flag which if True will activate Monte Carlo simulations for all models. 
 Note this will hugely increase the computation time.
+MC_SIM_ALL_MODELS = False
+
 # The results directory.
 RESULTS_DIR = '.'
+
+# The directory of results of an earlier analysis without clustering.
+PRE_RUN_DIR = None
 
 # The model selection technique to use.
 MODSEL = 'AIC'
@@ -143,4 +149,4 @@
 ##########################
 
 # Do not change!
-Relax_disp(pipe_name=pipe_name, pipe_bundle=pipe_bundle, 
results_dir=RESULTS_DIR, models=MODELS, grid_inc=GRID_INC, mc_sim_num=MC_NUM, 
modsel=MODSEL, insignificance=INSIGNIFICANCE, numeric_only=NUMERIC_ONLY)
+Relax_disp(pipe_name=pipe_name, pipe_bundle=pipe_bundle, 
results_dir=RESULTS_DIR, models=MODELS, grid_inc=GRID_INC, mc_sim_num=MC_NUM, 
modsel=MODSEL, pre_run_dir=PRE_RUN_DIR, insignificance=INSIGNIFICANCE, 
numeric_only=NUMERIC_ONLY, mc_sim_all_models=MC_SIM_ALL_MODELS)

Modified: trunk/sample_scripts/relax_disp/cpmg_analysis.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/sample_scripts/relax_disp/cpmg_analysis.py?rev=21708&r1=21707&r2=21708&view=diff
==============================================================================
--- trunk/sample_scripts/relax_disp/cpmg_analysis.py (original)
+++ trunk/sample_scripts/relax_disp/cpmg_analysis.py Fri Nov 29 11:11:40 2013
@@ -41,8 +41,14 @@
 # The number of Monte Carlo simulations to be used for error analysis at the 
end of the analysis.
 MC_NUM = 500
 
+# A flag which if True will activate Monte Carlo simulations for all models. 
 Note this will hugely increase the computation time.
+MC_SIM_ALL_MODELS = False
+
 # The results directory.
 RESULTS_DIR = '.'
+
+# The directory of results of an earlier analysis without clustering.
+PRE_RUN_DIR = None
 
 # The model selection technique to use.
 MODSEL = 'AIC'
@@ -151,4 +157,4 @@
 ##########################
 
 # Do not change!
-Relax_disp(pipe_name=pipe_name, pipe_bundle=pipe_bundle, 
results_dir=RESULTS_DIR, models=MODELS, grid_inc=GRID_INC, mc_sim_num=MC_NUM, 
modsel=MODSEL, insignificance=INSIGNIFICANCE, numeric_only=NUMERIC_ONLY)
+Relax_disp(pipe_name=pipe_name, pipe_bundle=pipe_bundle, 
results_dir=RESULTS_DIR, models=MODELS, grid_inc=GRID_INC, mc_sim_num=MC_NUM, 
modsel=MODSEL, pre_run_dir=PRE_RUN_DIR, insignificance=INSIGNIFICANCE, 
numeric_only=NUMERIC_ONLY, mc_sim_all_models=MC_SIM_ALL_MODELS)