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Posted by edward on January 13, 2014 - 17:00:
Author: bugman
Date: Mon Jan 13 17:00:50 2014
New Revision: 21974

URL: http://svn.gna.org/viewcvs/relax?rev=21974&view=rev
Log:
Updated the HTML version of the manual to relax 3.1.2 at 
http://www.nmr-relax.com/manual/index.html.


Modified:
    website/manual/Abbreviations.html
    website/manual/About_this_document.html
    website/manual/Access_internals_relax.html
    website/manual/Advanced_topics.html
    website/manual/All_model_free_models_script_mode_explanation.html
    website/manual/All_model_free_models_script_mode_sample_script.html
    website/manual/Alphabetical_listing_user_functions.html
    website/manual/Analysing_dispersion_in_prompt_script_UI_mode.html
    website/manual/Assigning_issue_yourself.html
    website/manual/Becoming_committer.html
    website/manual/Bibliography.html
    website/manual/Branch_creation.html
    website/manual/Branches.html
    website/manual/Brownian_rotational_diffusion.html
    website/manual/C_module_compilation.html
    website/manual/Calculating_NOE.html
    website/manual/Calculation_NOE_in_prompt_script_UI_mode.html
    website/manual/Cleaning_up.html
    website/manual/Closing_issue.html
    website/manual/Coding_conventions.html
    website/manual/Comments.html
    website/manual/Committers.html
    website/manual/Comparison_dispersion_analysis_software.html
    website/manual/Compilation_API_documentation_HTML_version.html
    website/manual/Compilation_user_manual_HTML_version.html
    website/manual/Compilation_user_manual_PDF_version.html
    website/manual/Components_Ri_prime_theta_equations.html
    website/manual/Conjugate_gradient_methods.html
    website/manual/Consistency_testing.html
    website/manual/Consistency_testing_analysis_references.html
    website/manual/Consistency_testing_in_prompt_script_UI_mode.html
    
website/manual/Consistency_testing_script_mode_calculation_error_propagation.html
    website/manual/Consistency_testing_script_mode_data_pipe_spin.html
    
website/manual/Consistency_testing_script_mode_relaxation_data_loading.html
    
website/manual/Consistency_testing_script_mode_relaxation_interactions.html
    website/manual/Consistency_testing_script_mode_sample_script.html
    
website/manual/Consistency_testing_script_mode_visualisation_data_output.html
    website/manual/Constraint_algorithms.html
    website/manual/Construction_Hessian.html
    website/manual/Construction_gradient.html
    website/manual/Construction_values_gradients_Hessians.html
    website/manual/Contents.html
    website/manual/Copying_modification_sublicencing_distribution_relax.html
    website/manual/DPL94_2_site_fast_exchange_R1_model.html
    website/manual/Dasha.html
    website/manual/Data_analysis_tools.html
    website/manual/Data_visualisation.html
    website/manual/Defaults.html
    website/manual/Dependencies.html
    website/manual/Diagonal_scaling.html
    website/manual/Discussing_major_changes.html
    website/manual/Dispersion_curve_insignificance.html
    website/manual/Dispersion_model_summary.html
    website/manual/Dispersion_parameter_grid_search.html
    website/manual/Dispersion_parameter_optimisation.html
    website/manual/Dispersion_script_mode_analysis_variables.html
    website/manual/Dispersion_script_mode_execution.html
    website/manual/Dispersion_script_mode_imports.html
    website/manual/Dispersion_script_mode_initialisation_data_pipe.html
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    website/manual/Dispersion_script_mode_sample_script.html
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    website/manual/Doc_strings.html
    website/manual/Docstring_sectioning.html
    website/manual/Ellipsoidal_diffusion_tensor.html
    website/manual/Ellipsoidal_dot_product_derivatives.html
    website/manual/Final_checks_curve_fitting.html
    website/manual/Format_commit_logs.html
    website/manual/From_spectra_peak_intensities_NOE.html
    website/manual/From_spectra_peak_intensities_relaxation_rates.html
    website/manual/Further_details.html
    website/manual/GPL.html
    website/manual/GUI.html
    website/manual/GUI_mode_deselect_spins.html
    website/manual/GUI_mode_manual_construction.html
    website/manual/GUI_mode_setting_up_data_pipe.html
    website/manual/GUI_mode_spins_from_sequence_file.html
    website/manual/GUI_mode_spins_from_structural_data.html
    website/manual/Generic_parts_relax.html
    website/manual/Grace.html
    website/manual/Graphical_user_interface_reference.html
    website/manual/Hessian.html
    website/manual/Hessian_modifications.html
    website/manual/How_use_relax.html
    website/manual/IT99_2_site_CPMG_model.html
    website/manual/Implementation.html
    website/manual/Implemented_models.html
    website/manual/Indentation.html
    website/manual/Index.html
    website/manual/Installation.html
    website/manual/Installation_instructions.html
    website/manual/Installation_on_GNU_Linux.html
    website/manual/Installation_on_MS_Windows.html
    website/manual/Installation_on_Mac_OS_X.html
    website/manual/Installation_on_your_OS.html
    website/manual/Interatomic_data_containers.html
    website/manual/Interfacing_with_other_programs.html
    website/manual/Introduction.html
    website/manual/Introduction_consistency_testing_relaxation_data.html
    
website/manual/Introduction_mathematics_behind_optimisation_relaxation_data.html
    website/manual/Introduction_multi_processor.html
    website/manual/Introduction_reduced_spectral_density_mapping.html
    website/manual/Introduction_relaxation_curve_fitting.html
    website/manual/Introduction_relaxation_dispersion.html
    website/manual/Introduction_steady_state_NOE.html
    website/manual/J_w_mapping_script_mode_calculation_error_propagation.html
    website/manual/J_w_mapping_script_mode_data_pipe_spin.html
    website/manual/J_w_mapping_script_mode_relaxation_data_loading.html
    website/manual/J_w_mapping_script_mode_relaxation_interactions.html
    website/manual/J_w_mapping_script_mode_sample_script.html
    website/manual/J_w_mapping_script_mode_visualisation_data_output.html
    website/manual/Joining_Gna.html
    website/manual/Joining_relax_project.html
    website/manual/Keeping_branch_up_date_using_svnmerge_py.html
    website/manual/LM63_2_site_fast_exchange_CPMG_model.html
    website/manual/LM63_3_site_fast_exchange_CPMG_model.html
    website/manual/Latest_sources_relax_repositories.html
    website/manual/Licence.html
    website/manual/Line_search_methods.html
    website/manual/Links_links_more_links.html
    website/manual/List_Figures.html
    website/manual/List_Tables.html
    website/manual/Literature.html
    website/manual/Logarithmic_barrier_constraint_algorithm.html
    website/manual/M61_2_site_fast_exchange_R1_model.html
    website/manual/M61_skew_2_site_fast_exchange_R1_model.html
    website/manual/MMQ_CR72_model.html
    website/manual/MP05_2_site_exchange_R1_model.html
    website/manual/Making_distribution_archives.html
    website/manual/Measuring_peak_intensities.html
    website/manual/Merging_branch_back_into_main_line.html
    website/manual/Method_Multipliers_algorithm.html
    website/manual/Model_free_analysis.html
    website/manual/Model_free_analysis_in_reverse.html
    website/manual/Model_free_analysis_references.html
    website/manual/Model_free_model_selection.html
    website/manual/Model_free_model_selection_script_mode_explanation.html
    website/manual/Model_free_model_selection_script_mode_sample_script.html
    website/manual/Model_free_optimisation_theory.html
    website/manual/Model_free_theory.html
    website/manual/Model_selection_references.html
    website/manual/Modelfree4.html
    
website/manual/Modification_latest_sources_creating_patches_with_Subversion.html
    
website/manual/Modification_official_releases_creating_patches_with_diff.html
    website/manual/Molecule_residue_spin_containers.html
    website/manual/Molmol.html
    website/manual/Monte_Carlo_simulation_elimination.html
    website/manual/NOE_GUI_mode_NOE_calculation.html
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    website/manual/NOE_GUI_mode_initialisation_data_pipe.html
    website/manual/NOE_GUI_mode_loading_data.html
    website/manual/NOE_GUI_mode_setting_up_spin_systems.html
    website/manual/NOE_GUI_mode_unresolved_spins.html
    website/manual/NOE_auto_analysis_in_GUI.html
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    website/manual/NOE_script_mode_setting_errors.html
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    website/manual/NOE_script_mode_unresolved_spins.html
    website/manual/NOE_script_mode_viewing_results.html
    website/manual/NS_2_site_R1_model.html
    website/manual/NS_2_site_expanded_CPMG_model.html
    website/manual/NS_3_site_R1_model.html
    website/manual/NS_3_site_linear_R1_model.html
    website/manual/NS_MMQ_2_site_model.html
    website/manual/NS_MMQ_3_site_linear_model.html
    website/manual/NS_MMQ_3_site_model.html
    website/manual/N_state_model_analysis_references.html
    website/manual/Navigation.html
    website/manual/News.html
    website/manual/OpenDX.html
    website/manual/Open_source_infrastructure.html
    website/manual/Optimisation.html
    website/manual/Optimisation_algorithms.html
    website/manual/Optimisation_all_model_free_models.html
    website/manual/Optimisation_diffusion_tensor_parameters.html
    website/manual/Optimisation_global_model.html
    website/manual/Optimisation_local_taum_models.html
    website/manual/Optimisation_model_free_models.html
    website/manual/Optimisation_relaxation_data_values_gradients_Hessians.html
    website/manual/Optimisation_single_model_free_model.html
    website/manual/Optional_programs.html
    website/manual/Other_citations.html
    website/manual/Other_methods.html
    website/manual/Power_users.html
    website/manual/Preface_citing_relax.html
    website/manual/Private_vs_public_messages.html
    website/manual/Program_features.html
    website/manual/PyMOL.html
    website/manual/Python.html
    website/manual/R2eff_model.html
    website/manual/Reduced_spectral_density_mapping.html
    website/manual/Reduced_spectral_density_mapping_references.html
    website/manual/Reference.html
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    website/manual/Relaxation_curve_fitting.html
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    website/manual/Relaxation_dispersion.html
    website/manual/Relaxation_dispersion_diagonal_scaling.html
    website/manual/Relaxation_dispersion_model_elimination.html
    
website/manual/Relaxation_dispersion_on_computer_cluster_using_OpenMPI.html
    website/manual/Relaxation_dispersion_optimisation_theory.html
    website/manual/Relaxation_dispersion_parameter_constraints.html
    website/manual/Relaxation_dispersion_references.html
    website/manual/Replying_message.html
    website/manual/Reporting_bugs.html
    website/manual/Ri_prime_theta_Hessians.html
    website/manual/Ri_prime_theta_gradients.html
    website/manual/Ri_prime_theta_values.html
    website/manual/Ri_prime_theta_values_gradients_Hessians.html
    website/manual/Ri_theta_Hessians.html
    website/manual/Ri_theta_gradients.html
    website/manual/Ri_theta_values.html
    website/manual/Ri_theta_values_gradients_Hessians.html
    website/manual/Running_non_compiled_version.html
    website/manual/SCons_build_system.html
    website/manual/SCons_help.html
    website/manual/Script_mode_manual_construction.html
    website/manual/Script_mode_spins_from_sequence_file.html
    website/manual/Script_mode_spins_from_structural_data.html
    website/manual/Scripting.html
    website/manual/Search_engine_indexing.html
    website/manual/Setup_in_GUI.html
    website/manual/Setup_in_prompt_script_UI.html
    website/manual/Single_model_free_model_script_mode_explanation.html
    website/manual/Single_model_free_model_script_mode_sample_script.html
    website/manual/Specific_analyses.html
    website/manual/Spectral_processing.html
    website/manual/Spherical_diffusion_tensor.html
    website/manual/Spheroidal_diffusion_tensor.html
    website/manual/Spheroidal_dot_product_derivatives.html
    website/manual/Submitting_bug_report.html
    website/manual/Submitting_changes_as_patch.html
    website/manual/Submitting_changes_relax_project.html
    website/manual/Supported_NMR_theories.html
    website/manual/TAP03_2_site_exchange_R1_model.html
    website/manual/TP02_2_site_exchange_R1_model.html
    website/manual/TSMFK01_2_site_CPMG_model.html
    website/manual/Tab_completion.html
    website/manual/Temperature_control_calibration.html
    website/manual/Topology_space.html
    website/manual/Trust_region_methods.html
    website/manual/Tutorial_adding_relaxation_dispersion_models.html
    website/manual/Usage_multi_processor.html
    website/manual/Usage_name_relax.html
    website/manual/User_functions.html
    website/manual/Variable_function_class_names.html
    website/manual/Version_control_using_Subversion.html
    website/manual/Whitespace.html
    website/manual/align_tensor_copy.html
    website/manual/align_tensor_delete.html
    website/manual/align_tensor_display.html
    website/manual/align_tensor_fix.html
    website/manual/align_tensor_init.html
    website/manual/align_tensor_matrix_angles.html
    website/manual/align_tensor_reduction.html
    website/manual/align_tensor_set_domain.html
    website/manual/align_tensor_svd.html
    website/manual/analytic_CPMG_models.html
    website/manual/analytic_MMQ_CPMG_models.html
    website/manual/analytic_R1_models.html
    website/manual/angles_diff_frame.html
    website/manual/base_dispersion_models.html
    website/manual/basics.html
    website/manual/bmrb_citation.html
    website/manual/bmrb_display.html
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    website/manual/bmrb_software.html
    website/manual/bmrb_software_select.html
    website/manual/bmrb_thiol_state.html
    website/manual/bmrb_write.html
    website/manual/bruker.png
    website/manual/bruker_read.html
    website/manual/bug_task_support_request_trackers.html
    website/manual/calc.html
    website/manual/chemical_shift_read.html
    website/manual/chi_squared_Hessian.html
    website/manual/chi_squared_function_chi2_theta.html
    website/manual/chi_squared_gradient.html
    website/manual/chi_squared_value.html
    website/manual/chi_squared_value_gradient_Hessian.html
    website/manual/clustered_relaxation_dispersion_analysis.html
    website/manual/concept_relax_data_model.html
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    website/manual/core_design_relax.html
    website/manual/correlation_time_Hessian_sphere.html
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    website/manual/correlation_time_gradient_sphere.html
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    website/manual/d_Auvergne_protocol_GUI_mode_BMRB_deposition.html
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    website/manual/help_system.html
    website/manual/images.log
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