Author: bugman
Date: Wed Jan 15 10:06:10 2014
New Revision: 21979
URL: http://svn.gna.org/viewcvs/relax?rev=21979&view=rev
Log:
Improvements for the
http://www.nmr-relax.com/analyses/relaxation_dispersion.html web page.
More links to the wiki have been added, and the MMQ descriptions improved.
Modified:
website/analyses/relaxation_dispersion.html
Modified: website/analyses/relaxation_dispersion.html
URL:
http://svn.gna.org/viewcvs/relax/website/analyses/relaxation_dispersion.html?rev=21979&r1=21978&r2=21979&view=diff
==============================================================================
--- website/analyses/relaxation_dispersion.html (original)
+++ website/analyses/relaxation_dispersion.html Wed Jan 15 10:06:10 2014
@@ -44,7 +44,7 @@
<li>Zero quantum (ZQ) CPMG-type data.</li>
<li>Double quantum (DQ) CPMG-type data.</li>
<li>Multiple quantum (MQ) CPMG-type data.</li>
- <li>Combined proton-heteronuclear SQ, ZQ, DQ and MQ CPMG-type data.
This is labelled as multiple-MQ or MMQ data.</li>
+ <li>Combined proton-heteronuclear SQ, ZQ, DQ and MQ CPMG-type data.
This is labelled as multiple MQ or MMQ data.</li>
<li>R<sub>1ρ</sub>-type data.</li>
</ul>
</div>
@@ -57,7 +57,7 @@
<p>The following models are independent of the experiment type:</p>
<ul>
- <li><b>'R2eff'</b>: This is the model used to determine the
R<sub>2eff</sub> or R<sub>1ρ</sub> values and errors required as the
base data for all other models.</li>
+ <li><b>'<a href="http://wiki.nmr-relax.com/R2eff";>R2eff</a>'</b>:
This is the model used to determine the R<sub>2eff</sub> or
R<sub>1ρ</sub> values and errors required as the base data for all other
models.</li>
<li><b>'<a href="http://wiki.nmr-relax.com/No_Rex";>No Rex</a>'</b>:
This is the model for no chemical exchange being present.</li>
</ul>
@@ -66,7 +66,7 @@
<ul>
<li><b>'<a href="http://wiki.nmr-relax.com/LM63";>LM63</a>'</b>: The
original Luz and Meiboom 1963 2-site fast exchange equation with parameters
<em>{R<sub>2</sub><sup>0</sup>, ..., Φ<sub>ex</sub>,
k<sub>ex</sub>}</em>.</li>
- <li><b>'LM63 3-site'</b>: The original Luz and Meiboom 1963 3-site
fast exchange equation with parameters <em>{R<sub>2</sub><sup>0</sup>, ...,
Φ<sub>exB</sub>, k<sub>B</sub>, Φ<sub>exC</sub>,
k<sub>C</sub>}</em>.</li>
+ <li><b>'<a href="http://wiki.nmr-relax.com/LM63_3-site";>LM63
3-site</a>'</b>: The original Luz and Meiboom 1963 3-site fast exchange
equation with parameters <em>{R<sub>2</sub><sup>0</sup>, ...,
Φ<sub>exB</sub>, k<sub>B</sub>, Φ<sub>exC</sub>,
k<sub>C</sub>}</em>.</li>
<li><b>'<a href="http://wiki.nmr-relax.com/CR72";>CR72</a>'</b>: The
reduced Carver and Richards 1972 2-site equation for most time scales whereby
the simplification <em>R<sub>2A</sub><sup>0</sup> =
R<sub>2B</sub><sup>0</sup></em> is assumed. It has the parameters
<em>{R<sub>2</sub><sup>0</sup>, ..., p<sub>A</sub>, Δω,
k<sub>ex</sub>}</em>.</li>
<li><b>'<a href="http://wiki.nmr-relax.com/CR72_full";>CR72
full</a>'</b>: The full Carver and Richards 1972 2-site equation for most
time scales with the parameters <em>{R<sub>2A</sub><sup>0</sup>,
R<sub>2B</sub><sup>0</sup>, ..., p<sub>A</sub>, Δω,
k<sub>ex</sub>}</em>.</li>
<li><b>'<a href="http://wiki.nmr-relax.com/IT99";>IT99</a>'</b>: The
Ishima and Torchia 1999 2-site model for all time scales with
<em>p<sub>A</sub> » p<sub>B</sub></em> and with parameters
<em>{R<sub>2</sub><sup>0</sup>, ..., Φ<sub>ex</sub>,
p<sub>A</sub>.Δω<sup>2</sup>, k<sub>ex</sub>}</em>.</li>
@@ -77,18 +77,18 @@
<p>The following analytic models are designed for the standard single
quantum CPMG-type experiments:</p>
<ul>
- <li><b>'NS CPMG 2-site expanded'</b>: A model for 2-site exchange
expanded using Maple by Nikolai Skrynnikov (Tollinger et al., 2001). It has
the parameters <em>{R<sub>2</sub><sup>0</sup>, ..., p<sub>A</sub>,
Δω, k<sub>ex</sub>}</em>.</li>
- <li><b>'NS CPMG 2-site 3D'</b>: The reduced model for 2-site exchange
using 3D magnetisation vectors whereby the simplification
<em>R<sub>2A</sub><sup>0</sup> = R<sub>2B</sub><sup>0</sup></em> is assumed.
It has the parameters <em>{R<sub>2</sub><sup>0</sup>, ..., p<sub>A</sub>,
Δω, k<sub>ex</sub>}</em>.</li>
- <li><b>'NS CPMG 2-site 3D full'</b>: The reduced model for 2-site
exchange using 3D magnetisation vectors with the parameters
<em>{R<sub>2A</sub><sup>0</sup>, R<sub>2B</sub><sup>0</sup>, ...,
p<sub>A</sub>, Δω, k<sub>ex</sub>}</em>.</li>
- <li><b>'NS CPMG 2-site star'</b>: The reduced model for 2-site
exchange using complex conjugate matrices whereby the simplification
<em>R<sub>2A</sub><sup>0</sup> = R<sub>2B</sub><sup>0</sup></em> is assumed.
It has the parameters <em>{R<sub>2</sub><sup>0</sup>, ..., p<sub>A</sub>,
Δω, k<sub>ex</sub>}</em>.</li>
- <li><b>'NS CPMG 2-site star full'</b>: The full model for 2-site
exchange using complex conjugate matrices with the parameters
<em>{R<sub>2A</sub><sup>0</sup>, R<sub>2B</sub><sup>0</sup>, ...,
p<sub>A</sub>, Δω, k<sub>ex</sub>}</em>.</li>
+ <li><b>'<a href="http://wiki.nmr-relax.com/NS_CPMG_2-site_expanded";>NS
CPMG 2-site expanded</a>'</b>: A model for 2-site exchange expanded using
Maple by Nikolai Skrynnikov (Tollinger et al., 2001). It has the parameters
<em>{R<sub>2</sub><sup>0</sup>, ..., p<sub>A</sub>, Δω,
k<sub>ex</sub>}</em>.</li>
+ <li><b>'<a href="http://wiki.nmr-relax.com/NS_CPMG_2-site_3D";>NS CPMG
2-site 3D</a>'</b>: The reduced model for 2-site exchange using 3D
magnetisation vectors whereby the simplification
<em>R<sub>2A</sub><sup>0</sup> = R<sub>2B</sub><sup>0</sup></em> is assumed.
It has the parameters <em>{R<sub>2</sub><sup>0</sup>, ..., p<sub>A</sub>,
Δω, k<sub>ex</sub>}</em>.</li>
+ <li><b>'<a href="http://wiki.nmr-relax.com/NS_CPMG_2-site_3D_full";>NS
CPMG 2-site 3D full</a>'</b>: The reduced model for 2-site exchange using 3D
magnetisation vectors with the parameters <em>{R<sub>2A</sub><sup>0</sup>,
R<sub>2B</sub><sup>0</sup>, ..., p<sub>A</sub>, Δω,
k<sub>ex</sub>}</em>.</li>
+ <li><b>'<a href="http://wiki.nmr-relax.com/NS_CPMG_2-site_star";>NS
CPMG 2-site star</a>'</b>: The reduced model for 2-site exchange using
complex conjugate matrices whereby the simplification
<em>R<sub>2A</sub><sup>0</sup> = R<sub>2B</sub><sup>0</sup></em> is assumed.
It has the parameters <em>{R<sub>2</sub><sup>0</sup>, ..., p<sub>A</sub>,
Δω, k<sub>ex</sub>}</em>.</li>
+ <li><b>'<a
href="http://wiki.nmr-relax.com/NS_CPMG_2-site_star_full";>NS CPMG 2-site star
full</a>'</b>: The full model for 2-site exchange using complex conjugate
matrices with the parameters <em>{R<sub>2A</sub><sup>0</sup>,
R<sub>2B</sub><sup>0</sup>, ..., p<sub>A</sub>, Δω,
k<sub>ex</sub>}</em>.</li>
</ul>
<h3>Analytic models for MMQ-type data</h3>
- <p>The following analytic models are designed for combined
proton-heteronuclear SQ, ZQ, DQ and MQ (MMQ, or multi-multiple quantum)
CPMG-type experiments:</p>
+ <p>The following analytic models are designed for combined
proton-heteronuclear SQ, ZQ, DQ and MQ (MMQ, or multiple MQ) CPMG-type
experiments:</p>
<ul>
- <li><b>'<a href="http://wiki.nmr-relax.com/MMQ_CR72";>MMQ
CR72</a>'</b>: The Carver and Richards (1972) 2-site model for most time
scales expanded for MQ CPMG data by Korzhnev et al., 2004. It has the
parameters <em>{R<sub>2</sub><sup>0</sup>, ..., p<sub>A</sub>, Δω,
Δω<sup>H</sup>, k<sub>ex</sub>}</em>.</li>
+ <li><b>'<a href="http://wiki.nmr-relax.com/MMQ_CR72";>MMQ
CR72</a>'</b>: The Carver and Richards (1972) 2-site model for most time
scales expanded for MMQ CPMG data by Korzhnev et al., 2004. It has the
parameters <em>{R<sub>2</sub><sup>0</sup>, ..., p<sub>A</sub>, Δω,
Δω<sup>H</sup>, k<sub>ex</sub>}</em>.</li>
</ul>
<h3>Numeric models for MMQ-type data</h3>
r21979 - /website/analyses/relaxation_dispersion.html