mailr22198 - /trunk/test_suite/system_tests/relax_disp.py


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Posted by tlinnet on February 18, 2014 - 12:19:
Author: tlinnet
Date: Tue Feb 18 12:19:41 2014
New Revision: 22198

URL: http://svn.gna.org/viewcvs/relax?rev=22198&view=rev
Log:
Added systemtest to catch bug: relax -s 
Relax_disp.test_bug_21665_cpmg_two_fields_two_delaytimes_fail

Regarding bug #21665, (https://gna.org/bugs/?21665) - Running a CPMG analysis 
with two fields at two delay times.

Modified:
    trunk/test_suite/system_tests/relax_disp.py

Modified: trunk/test_suite/system_tests/relax_disp.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/test_suite/system_tests/relax_disp.py?rev=22198&r1=22197&r2=22198&view=diff
==============================================================================
--- trunk/test_suite/system_tests/relax_disp.py (original)
+++ trunk/test_suite/system_tests/relax_disp.py Tue Feb 18 12:19:41 2014
@@ -264,6 +264,21 @@
         relax_disp.Relax_disp.opt_max_iterations = 1000
         relax_disp.Relax_disp(pipe_name="origin - relax_disp (Thu Jan  2 
13:46:44 2014)", pipe_bundle="relax_disp (Thu Jan  2 13:46:44 2014)", 
results_dir=self.tmpdir, models=['R2eff', 'No Rex', 'CR72', 'NS CPMG 2-site 
expanded'], grid_inc=3, mc_sim_num=5, modsel='AIC', pre_run_dir=None, 
insignificance=1.0, numeric_only=False, mc_sim_all_models=False, 
eliminate=True)
 
+
+    def test_bug_21665_cpmg_two_fields_two_delaytimes_fail(self):
+        """U{Bug #21665<https://gna.org/bugs/?21665>} catch, the failure due 
to a a CPMG analysis recorded at two fields at two delay times."""
+
+        # Clear the data store.
+        self.interpreter.reset()
+
+        # Load the state.
+        state = status.install_path + 
sep+'test_suite'+sep+'shared_data'+sep+'dispersion'+sep+'bug_21665.bz2'
+        self.interpreter.state.load(state, force=True)
+
+        # Execute the auto-analysis (fast).
+        relax_disp.Relax_disp.opt_func_tol = 1e-5
+        relax_disp.Relax_disp.opt_max_iterations = 1000
+        relax_disp.Relax_disp(pipe_name="compare_128_FT_R2eff", 
pipe_bundle="cpmg_disp_sod1d90a", results_dir=self.tmpdir, models=['R2eff'], 
grid_inc=3, mc_sim_num=5, modsel='AIC', pre_run_dir=None, insignificance=1.0, 
numeric_only=False, mc_sim_all_models=False, eliminate=True)
 
 
     def test_curve_type_cpmg_fixed_time(self):




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