mailr22459 - /trunk/specific_analyses/relax_disp/api.py


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Posted by tlinnet on March 12, 2014 - 12:04:
Author: tlinnet
Date: Wed Mar 12 12:04:46 2014
New Revision: 22459

URL: http://svn.gna.org/viewcvs/relax?rev=22459&view=rev
Log:
Added parameter 'w_eff', the effective field in rotating frame calculation to 
dispersion API.

Regarding sr #3124, (https://gna.org/support/index.php?3124) - Grace graphs 
production for R1rho analysis with R2_eff as function of Omega_eff.

Modified:
    trunk/specific_analyses/relax_disp/api.py

Modified: trunk/specific_analyses/relax_disp/api.py
URL: 
http://svn.gna.org/viewcvs/relax/trunk/specific_analyses/relax_disp/api.py?rev=22459&r1=22458&r2=22459&view=diff
==============================================================================
--- trunk/specific_analyses/relax_disp/api.py   (original)
+++ trunk/specific_analyses/relax_disp/api.py   Wed Mar 12 12:04:46 2014
@@ -108,6 +108,7 @@
         self.PARAMS.add('kC', scope='spin', default=10000.0, 
desc='Approximate chemical exchange rate constant between sites A and C 
(rad.s^-1)', set='params', py_type=float, grace_string='\\qk\\sC\\N\\Q 
(rad.s\\S-1\\N)', err=True, sim=True)
         self.PARAMS.add('tex', scope='spin', default=1.0/10000.0, desc='The 
time of exchange (tex = 1/kex)', set='params', py_type=float, 
grace_string='\\q\\xt\\B\\sex\\N\\Q (s.rad\\S-1\\N)', err=True, sim=True)
         self.PARAMS.add('theta', scope='spin', desc='Rotating frame tilt 
angle : ( theta = arctan(w_1 / Omega) )', set='params', py_type=dict, 
err=False, sim=False)
+        self.PARAMS.add('w_eff', scope='spin', desc='Effective field in 
rotating frame : ( w_eff = sqrt(Omega^2 + w_1^2) )', set='params', 
py_type=dict, err=False, sim=False)
         self.PARAMS.add('k_AB', scope='spin', default=10000.0, desc='The 
exchange rate from state A to state B', set='params', py_type=float, 
grace_string='\\qk\\sAB\\N\\Q (rad.s\\S-1\\N)', err=True, sim=True)
         self.PARAMS.add('k_BA', scope='spin', default=10000.0, desc='The 
exchange rate from state B to state A', set='params', py_type=float, 
grace_string='\\qk\\sBA\\N\\Q (rad.s\\S-1\\N)', err=True, sim=True)
         self.PARAMS.add('params', scope='spin', desc='The model parameters', 
py_type=list)
@@ -838,6 +839,7 @@
     _table.add_row(["Exchange rate between sites A and C (rad/s)", "'kC'", 
"10000.0"])
     _table.add_row(["Time of exchange (s/rad)", "'tex'", "1.0/10000.0"])
     _table.add_row(["Rotating frame tilt angle", "'theta'", "0.0"])
+    _table.add_row(["Effective field in rotating frame", "'w_eff'", "0.0"])
     _table.add_row(["Exchange rate from state A to state B (rad/s)", 
"'k_AB'", "10000.0"])
     _table.add_row(["Exchange rate from state B to state A (rad/s)", 
"'k_BA'", "10000.0"])
     default_value_doc.add_table(_table.label)
@@ -1356,6 +1358,7 @@
     _table.add_row(["Exchange rate from state B to state A (rad/s)", 
"'k_BA'"])
     _table.add_row(["Time of exchange (s/rad)", "'tex'"])
     _table.add_row(["Rotating frame tilt angle", "'theta'"])
+    _table.add_row(["Effective field in rotating frame", "'w_eff'"])
     _table.add_row(["Peak intensities (series)", "'intensities'"])
     _table.add_row(["CPMG pulse train frequency (series, Hz)", 
"'cpmg_frqs'"])
     return_data_name_doc.add_table(_table.label)




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